Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC013828.2-201ENST00000532487 235 ntBASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 AC008127.2-201ENST00000549925 1075 ntBASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 HSPE1P3-201ENST00000559254 309 ntBASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 MIR5186-201ENST00000577504 120 ntBASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 NF1P5-201ENST00000588287 448 ntBASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 FAM25E-202ENST00000608562 189 ntBASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 AC116447.1-201ENST00000613153 453 ntBASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 AC095031.1-201ENST00000623685 672 ntBASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 AL603839.4-201ENST00000624658 1005 ntBASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 CRYM-AS1-204ENST00000637983 556 ntBASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 AL445437.1-201ENST00000623157 3087 ntBASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 AC105074.1-201ENST00000623380 3095 ntBASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 AC016588.2-201ENST00000632484 3021 ntBASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 RNU1-130P-201ENST00000363930 160 ntBASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 RNU6-259P-201ENST00000383999 107 ntBASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 RNA5SP87-201ENST00000384155 118 ntBASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 SNORD66.1-201ENST00000391230 76 ntBASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 MIR298-201ENST00000401212 88 ntBASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 RPS23P10-201ENST00000416185 486 ntBASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 RPL7AP25-201ENST00000423357 805 ntBASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 AC096632.1-201ENST00000427395 310 ntBASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 VN1R54P-201ENST00000435210 1049 ntBASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 ARPC3P5-201ENST00000448802 534 ntBASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 AC026410.2-201ENST00000460281 156 ntBASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 AC092324.1-201ENST00000468671 324 ntBASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 AC017015.1-201ENST00000477387 286 ntBASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 AC106872.3-201ENST00000495104 446 ntBASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 RPL30P11-201ENST00000495304 339 ntBASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 AC087883.1-201ENST00000551882 391 ntBASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 CYP4A43P-201ENST00000568156 121 ntBASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 AC126118.1-201ENST00000607744 628 ntBASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 AC097468.3-201ENST00000607956 456 ntBASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 AL031666.3-201ENST00000609320 1006 ntBASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
ATG4AQ8WYN0 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.53□□□□□ -1.69
ATG4AQ8WYN0 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
ATG4AQ8WYN0 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 AC009229.4-201ENST00000623854 1947 ntBASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 DCAF13P1-201ENST00000495256 1330 ntBASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 RNU6-777P-201ENST00000364265 104 ntBASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 RNU6-1293P-201ENST00000384077 107 ntBASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 MIR513A2-201ENST00000385249 127 ntBASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 GLULP6-201ENST00000399502 913 ntBASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 AC097374.1-203ENST00000400783 485 ntBASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 AL023807.1-201ENST00000407932 359 ntBASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 RN7SKP247-201ENST00000411094 308 ntBASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 RNU6-603P-201ENST00000411403 107 ntBASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 RPS3AP9-201ENST00000417027 792 ntBASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 AL590762.4-201ENST00000425885 253 ntBASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 AL360081.1-201ENST00000428299 555 ntBASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 RPL12P3-201ENST00000440080 396 ntBASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 AL022238.1-201ENST00000442557 355 ntBASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 AC073587.1-201ENST00000447093 876 ntBASIC4.52□□□□□ -1.69
ATG4AQ8WYN0 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms