Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 ATP5F1P3-201ENST00000397213 657 ntBASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 RPS3AP9-201ENST00000417027 792 ntBASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 MTND4P20-201ENST00000424125 869 ntBASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 RPL31P54-201ENST00000429803 370 ntBASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 UBE2V1P1-201ENST00000430836 445 ntBASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 AC083863.1-201ENST00000438811 231 ntBASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 MTCYBP34-201ENST00000439552 670 ntBASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 HMGB1P37-201ENST00000439613 609 ntBASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 MTND5P2-201ENST00000442927 1142 ntBASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 MTCYBP3-201ENST00000445588 1137 ntBASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 RPL12P26-201ENST00000452430 487 ntBASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 RPL7P38-201ENST00000488396 739 ntBASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 AC068305.1-201ENST00000497406 726 ntBASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 RN7SKP122-201ENST00000515923 296 ntBASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 NARSP2-201ENST00000518524 679 ntBASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 SULT1C2P1-202ENST00000562418 459 ntBASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 AC023575.1-201ENST00000580510 358 ntBASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 AC013444.2-201ENST00000603317 787 ntBASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 AC069304.2-201ENST00000605154 435 ntBASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 AC110741.2-201ENST00000605278 268 ntBASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 AL591424.2-201ENST00000617023 128 ntBASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 AL603755.1-201ENST00000619504 163 ntBASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 MAPK10-372ENST00000641954 3413 ntBASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4□□□□□ -1.77
SLC44A1Q8WWI5 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4□□□□□ -1.77
SLC44A1Q8WWI5 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SLC44A1Q8WWI5 AL390862.1-201ENST00000635467 1469 ntBASIC4□□□□□ -1.77
SLC44A1Q8WWI5 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4□□□□□ -1.77
SLC44A1Q8WWI5 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
SLC44A1Q8WWI5 RNU6-216P-201ENST00000363282 104 ntBASIC4□□□□□ -1.77
SLC44A1Q8WWI5 Y_RNA.169-201ENST00000363745 96 ntBASIC4□□□□□ -1.77
SLC44A1Q8WWI5 SNORA70.2-201ENST00000364506 135 ntBASIC4□□□□□ -1.77
SLC44A1Q8WWI5 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4□□□□□ -1.77
SLC44A1Q8WWI5 RNU4-72P-201ENST00000410754 173 ntBASIC4□□□□□ -1.77
SLC44A1Q8WWI5 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4□□□□□ -1.77
SLC44A1Q8WWI5 NAP1L1P2-201ENST00000414182 1089 ntBASIC4□□□□□ -1.77
SLC44A1Q8WWI5 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4□□□□□ -1.77
SLC44A1Q8WWI5 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4□□□□□ -1.77
SLC44A1Q8WWI5 AC098592.1-201ENST00000419352 333 ntBASIC4□□□□□ -1.77
SLC44A1Q8WWI5 RSL24D1P6-201ENST00000426934 401 ntBASIC4□□□□□ -1.77
SLC44A1Q8WWI5 AL365396.1-201ENST00000430854 671 ntBASIC4□□□□□ -1.77
SLC44A1Q8WWI5 UBE2D3P1-201ENST00000436669 444 ntBASIC4□□□□□ -1.77
SLC44A1Q8WWI5 MTND2P20-201ENST00000440805 661 ntBASIC4□□□□□ -1.77
SLC44A1Q8WWI5 RPS4XP4-201ENST00000443195 763 ntBASIC4□□□□□ -1.77
SLC44A1Q8WWI5 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4□□□□□ -1.77
SLC44A1Q8WWI5 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4□□□□□ -1.77
SLC44A1Q8WWI5 AC010618.1-201ENST00000469924 477 ntBASIC4□□□□□ -1.77
SLC44A1Q8WWI5 AC110792.2-201ENST00000510278 224 ntBASIC4□□□□□ -1.77
SLC44A1Q8WWI5 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4□□□□□ -1.77
SLC44A1Q8WWI5 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4□□□□□ -1.77
SLC44A1Q8WWI5 AC010486.3-201ENST00000511602 785 ntBASIC4□□□□□ -1.77
SLC44A1Q8WWI5 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4□□□□□ -1.77
SLC44A1Q8WWI5 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4□□□□□ -1.77
SLC44A1Q8WWI5 AC005798.1-201ENST00000513715 387 ntBASIC4□□□□□ -1.77
SLC44A1Q8WWI5 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4□□□□□ -1.77
SLC44A1Q8WWI5 MIR2114-201ENST00000516645 80 ntBASIC4□□□□□ -1.77
SLC44A1Q8WWI5 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4□□□□□ -1.77
SLC44A1Q8WWI5 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4□□□□□ -1.77
SLC44A1Q8WWI5 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4□□□□□ -1.77
SLC44A1Q8WWI5 UBE2NP1-201ENST00000545592 458 ntBASIC4□□□□□ -1.77
SLC44A1Q8WWI5 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4□□□□□ -1.77
SLC44A1Q8WWI5 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4□□□□□ -1.77
SLC44A1Q8WWI5 AC125611.1-201ENST00000549563 229 ntBASIC4□□□□□ -1.77
SLC44A1Q8WWI5 AC008015.1-201ENST00000555505 465 ntBASIC4□□□□□ -1.77
SLC44A1Q8WWI5 AL161713.1-201ENST00000555538 145 ntBASIC4□□□□□ -1.77
SLC44A1Q8WWI5 AC141257.3-201ENST00000572906 215 ntBASIC4□□□□□ -1.77
SLC44A1Q8WWI5 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4□□□□□ -1.77
SLC44A1Q8WWI5 MIR4999-201ENST00000585029 91 ntBASIC4□□□□□ -1.77
SLC44A1Q8WWI5 AC103881.1-201ENST00000603476 538 ntBASIC4□□□□□ -1.77
SLC44A1Q8WWI5 AC106791.2-201ENST00000604680 391 ntBASIC4□□□□□ -1.77
SLC44A1Q8WWI5 AC112220.3-201ENST00000605502 502 ntBASIC4□□□□□ -1.77
SLC44A1Q8WWI5 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4□□□□□ -1.77
SLC44A1Q8WWI5 AL139418.1-201ENST00000613613 177 ntBASIC4□□□□□ -1.77
SLC44A1Q8WWI5 AC098679.5-201ENST00000624394 571 ntBASIC4□□□□□ -1.77
SLC44A1Q8WWI5 AP000843.1-201ENST00000624880 701 ntBASIC4□□□□□ -1.77
SLC44A1Q8WWI5 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4□□□□□ -1.77
SLC44A1Q8WWI5 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SLC44A1Q8WWI5 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4□□□□□ -1.77
SLC44A1Q8WWI5 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
SLC44A1Q8WWI5 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4□□□□□ -1.77
SLC44A1Q8WWI5 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4□□□□□ -1.77
SLC44A1Q8WWI5 ZNF542P-204ENST00000482727 1305 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms