Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 PRPF38AP2-201ENST00000438179 851 ntBASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 RPS24P13-201ENST00000442520 397 ntBASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 GAPDHP25-201ENST00000447061 1001 ntBASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 AC073850.1-201ENST00000449243 255 ntBASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 AL356010.1-201ENST00000456364 102 ntBASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 RPL35AP28-201ENST00000459730 331 ntBASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 RN7SL97P-201ENST00000486780 299 ntBASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 RPS23P1-201ENST00000491662 432 ntBASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 RPS4XP18-201ENST00000495480 763 ntBASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 FAM206BP-201ENST00000510179 541 ntBASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 Y_RNA.665-201ENST00000516177 98 ntBASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 RNU6-764P-201ENST00000516396 105 ntBASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 RNA5SP373-201ENST00000517271 95 ntBASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 AC090572.1-201ENST00000519251 160 ntBASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 HIGD1AP6-201ENST00000521833 279 ntBASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 AC022616.3-201ENST00000523940 148 ntBASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 OR4R1P-201ENST00000529879 463 ntBASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 EIF4A2P5-201ENST00000529914 499 ntBASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 OR5B10P-201ENST00000532869 642 ntBASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 AC122688.1-201ENST00000541494 223 ntBASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 AC008083.2-201ENST00000546707 476 ntBASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 MIR6133-201ENST00000617057 108 ntBASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 AC009237.17-201ENST00000618111 748 ntBASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 ASNSP3-201ENST00000451989 1306 ntBASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 AC006206.1-201ENST00000544842 3387 ntBASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 AC112255.1-201ENST00000624070 2493 ntBASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 Y_RNA.176-201ENST00000363815 109 ntBASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 SNORA62.2-201ENST00000364672 152 ntBASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 MIR1-2-201ENST00000384961 85 ntBASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 AL133270.1-201ENST00000402635 279 ntBASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 MTATP6P29-201ENST00000415057 132 ntBASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 RPL12P17-201ENST00000432393 498 ntBASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 AL590399.4-201ENST00000436561 601 ntBASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 RPS11P7-201ENST00000442125 465 ntBASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 AZGP1P2-201ENST00000454506 345 ntBASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 RPS17P5-201ENST00000498293 408 ntBASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 OR51A1P-201ENST00000511110 946 ntBASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 RNU6-388P-201ENST00000517012 105 ntBASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 RNU6-389P-201ENST00000517048 105 ntBASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 NARSP2-201ENST00000518524 679 ntBASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 RGS4-209ENST00000531057 544 ntTSL 4 BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 AC123904.2-201ENST00000548059 300 ntBASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 OR1F2P-201ENST00000570470 933 ntBASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 AC005341.1-201ENST00000571086 708 ntBASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 MIR4646-201ENST00000580775 63 ntBASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 MIR3118-1-201ENST00000581787 76 ntBASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 AC005357.1-201ENST00000588399 301 ntBASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 AC073539.2-201ENST00000597113 165 ntBASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 AP000769.2-201ENST00000602344 396 ntBASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 U2.22-201ENST00000636441 106 ntBASIC5.63□□□□□ -1.51
SHKBP1Q8TBC3 AL353796.1-201ENST00000561542 3241 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms