Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC009963.1-201ENST00000417265 157 ntBASIC4.05□□□□□ -1.76
VPS8Q8N3P4 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.05□□□□□ -1.76
VPS8Q8N3P4 HMGB1P25-201ENST00000468402 607 ntBASIC4.05□□□□□ -1.76
VPS8Q8N3P4 POU5F1P7-201ENST00000508759 541 ntBASIC4.05□□□□□ -1.76
VPS8Q8N3P4 snoU109.6-201ENST00000516831 118 ntBASIC4.05□□□□□ -1.76
VPS8Q8N3P4 AC123904.3-201ENST00000547218 814 ntBASIC4.05□□□□□ -1.76
VPS8Q8N3P4 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.05□□□□□ -1.76
VPS8Q8N3P4 AC092608.2-201ENST00000624427 218 ntBASIC4.05□□□□□ -1.76
VPS8Q8N3P4 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
VPS8Q8N3P4 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VPS8Q8N3P4 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
VPS8Q8N3P4 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
VPS8Q8N3P4 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
VPS8Q8N3P4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VPS8Q8N3P4 RNU6-178P-201ENST00000384631 104 ntBASIC4.04□□□□□ -1.76
VPS8Q8N3P4 RPS20P25-201ENST00000412447 352 ntBASIC4.04□□□□□ -1.76
VPS8Q8N3P4 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
VPS8Q8N3P4 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.04□□□□□ -1.76
VPS8Q8N3P4 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VPS8Q8N3P4 AC027176.1-201ENST00000560204 514 ntBASIC4.04□□□□□ -1.76
VPS8Q8N3P4 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
VPS8Q8N3P4 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS8Q8N3P4 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.04□□□□□ -1.76
VPS8Q8N3P4 FTLP6-201ENST00000355274 422 ntBASIC4.04□□□□□ -1.76
VPS8Q8N3P4 AL672167.1-206ENST00000356293 943 ntBASIC4.04□□□□□ -1.76
VPS8Q8N3P4 SDCBPP3-201ENST00000419629 891 ntBASIC4.04□□□□□ -1.76
VPS8Q8N3P4 RPL9P33-201ENST00000484311 566 ntBASIC4.04□□□□□ -1.76
VPS8Q8N3P4 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS8Q8N3P4 MIR3945-201ENST00000581853 98 ntBASIC4.04□□□□□ -1.76
VPS8Q8N3P4 AC013412.1-201ENST00000610687 192 ntBASIC4.04□□□□□ -1.76
VPS8Q8N3P4 CRYM-AS1-204ENST00000637983 556 ntBASIC4.04□□□□□ -1.76
VPS8Q8N3P4 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VPS8Q8N3P4 MTCO1P24-201ENST00000515438 1558 ntBASIC4.03□□□□□ -1.76
VPS8Q8N3P4 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC4.03□□□□□ -1.76
VPS8Q8N3P4 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VPS8Q8N3P4 AC104446.1-201ENST00000613728 1321 ntBASIC4.03□□□□□ -1.76
VPS8Q8N3P4 NACA3P-201ENST00000359690 648 ntBASIC4.03□□□□□ -1.76
VPS8Q8N3P4 RNA5SP68-201ENST00000363885 119 ntBASIC4.03□□□□□ -1.76
VPS8Q8N3P4 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VPS8Q8N3P4 MIR196B-201ENST00000384852 84 ntBASIC4.03□□□□□ -1.76
VPS8Q8N3P4 SNORD88.1-201ENST00000408684 91 ntBASIC4.03□□□□□ -1.76
VPS8Q8N3P4 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.03□□□□□ -1.76
VPS8Q8N3P4 USP9YP5-201ENST00000511770 630 ntBASIC4.03□□□□□ -1.76
VPS8Q8N3P4 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.03□□□□□ -1.76
VPS8Q8N3P4 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS8Q8N3P4 AC090819.1-201ENST00000523800 1111 ntBASIC4.03□□□□□ -1.76
VPS8Q8N3P4 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VPS8Q8N3P4 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
VPS8Q8N3P4 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS8Q8N3P4 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
VPS8Q8N3P4 AC016717.2-201ENST00000609089 5141 ntBASIC4.02□□□□□ -1.77
VPS8Q8N3P4 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.02□□□□□ -1.77
VPS8Q8N3P4 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
VPS8Q8N3P4 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
VPS8Q8N3P4 AC134882.1-201ENST00000603738 1676 ntBASIC4.02□□□□□ -1.77
VPS8Q8N3P4 MTCO3P31-201ENST00000405526 789 ntBASIC4.02□□□□□ -1.77
VPS8Q8N3P4 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.02□□□□□ -1.77
VPS8Q8N3P4 FCF1P1-201ENST00000432690 571 ntBASIC4.02□□□□□ -1.77
VPS8Q8N3P4 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.02□□□□□ -1.77
VPS8Q8N3P4 AP000893.1-201ENST00000474462 794 ntBASIC4.02□□□□□ -1.77
VPS8Q8N3P4 AC126182.1-201ENST00000478134 357 ntBASIC4.02□□□□□ -1.77
VPS8Q8N3P4 AC092185.1-201ENST00000491371 97 ntBASIC4.02□□□□□ -1.77
VPS8Q8N3P4 RNA5SP148-201ENST00000516527 94 ntBASIC4.02□□□□□ -1.77
VPS8Q8N3P4 RPL12P22-201ENST00000519073 490 ntBASIC4.02□□□□□ -1.77
VPS8Q8N3P4 VTA1P2-201ENST00000520205 911 ntBASIC4.02□□□□□ -1.77
VPS8Q8N3P4 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.02□□□□□ -1.77
VPS8Q8N3P4 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VPS8Q8N3P4 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.01□□□□□ -1.77
VPS8Q8N3P4 AC012498.1-201ENST00000424037 437 ntBASIC4.01□□□□□ -1.77
VPS8Q8N3P4 RPS6P12-201ENST00000432491 726 ntBASIC4.01□□□□□ -1.77
VPS8Q8N3P4 AL606490.7-201ENST00000433136 191 ntBASIC4.01□□□□□ -1.77
VPS8Q8N3P4 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.01□□□□□ -1.77
VPS8Q8N3P4 AC128713.1-201ENST00000471495 306 ntBASIC4.01□□□□□ -1.77
VPS8Q8N3P4 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.01□□□□□ -1.77
VPS8Q8N3P4 UBTFL10-201ENST00000528532 562 ntBASIC4.01□□□□□ -1.77
VPS8Q8N3P4 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.01□□□□□ -1.77
VPS8Q8N3P4 AC128657.1-201ENST00000549459 145 ntBASIC4.01□□□□□ -1.77
VPS8Q8N3P4 TRAV37-201ENST00000553906 342 ntBASIC4.01□□□□□ -1.77
VPS8Q8N3P4 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.01□□□□□ -1.77
VPS8Q8N3P4 MIR6715B-201ENST00000637172 77 ntBASIC4.01□□□□□ -1.77
VPS8Q8N3P4 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VPS8Q8N3P4 AC087565.3-202ENST00000642085 1603 ntBASIC4□□□□□ -1.77
VPS8Q8N3P4 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
VPS8Q8N3P4 MIR592-201ENST00000384959 97 ntBASIC4□□□□□ -1.77
VPS8Q8N3P4 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4□□□□□ -1.77
VPS8Q8N3P4 RPL12P46-201ENST00000436610 195 ntBASIC4□□□□□ -1.77
VPS8Q8N3P4 RPL7P59-201ENST00000447700 943 ntBASIC4□□□□□ -1.77
VPS8Q8N3P4 RPL23AP15-201ENST00000450202 459 ntBASIC4□□□□□ -1.77
VPS8Q8N3P4 RPL36AP33-201ENST00000450395 310 ntBASIC4□□□□□ -1.77
VPS8Q8N3P4 SNRPGP5-201ENST00000456003 220 ntBASIC4□□□□□ -1.77
VPS8Q8N3P4 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4□□□□□ -1.77
VPS8Q8N3P4 AL035404.1-201ENST00000497982 568 ntBASIC4□□□□□ -1.77
VPS8Q8N3P4 RFPL1S-203ENST00000539579 330 ntBASIC4□□□□□ -1.77
VPS8Q8N3P4 OR7K1P-201ENST00000546439 926 ntBASIC4□□□□□ -1.77
VPS8Q8N3P4 AC025260.1-201ENST00000548858 430 ntBASIC4□□□□□ -1.77
VPS8Q8N3P4 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4□□□□□ -1.77
VPS8Q8N3P4 AC010620.2-201ENST00000600135 313 ntBASIC4□□□□□ -1.77
VPS8Q8N3P4 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4□□□□□ -1.77
VPS8Q8N3P4 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4□□□□□ -1.77
VPS8Q8N3P4 AC092079.1-201ENST00000558620 1985 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms