Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 OR4A45P-201ENST00000529954 901 ntBASIC3.94□□□□□ -1.78
BEST3Q8N1M1 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.94□□□□□ -1.78
BEST3Q8N1M1 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.94□□□□□ -1.78
BEST3Q8N1M1 AC007954.1-201ENST00000554198 494 ntBASIC3.94□□□□□ -1.78
BEST3Q8N1M1 AL161713.1-201ENST00000555538 145 ntBASIC3.94□□□□□ -1.78
BEST3Q8N1M1 BNIP3P5-201ENST00000562290 498 ntBASIC3.94□□□□□ -1.78
BEST3Q8N1M1 RPL23AP97-201ENST00000568955 471 ntBASIC3.94□□□□□ -1.78
BEST3Q8N1M1 AC090312.1-201ENST00000580637 348 ntBASIC3.94□□□□□ -1.78
BEST3Q8N1M1 MIR4637-201ENST00000582405 84 ntBASIC3.94□□□□□ -1.78
BEST3Q8N1M1 PIGPP4-201ENST00000584447 307 ntBASIC3.94□□□□□ -1.78
BEST3Q8N1M1 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.94□□□□□ -1.78
BEST3Q8N1M1 AC010738.1-201ENST00000604970 987 ntBASIC3.94□□□□□ -1.78
BEST3Q8N1M1 AL159169.3-201ENST00000608871 561 ntBASIC3.94□□□□□ -1.78
BEST3Q8N1M1 AC024941.1-201ENST00000612250 334 ntBASIC3.94□□□□□ -1.78
BEST3Q8N1M1 FAM27D1-201ENST00000612308 341 ntBASIC3.94□□□□□ -1.78
BEST3Q8N1M1 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.94□□□□□ -1.78
BEST3Q8N1M1 AC067931.1-201ENST00000624190 671 ntBASIC3.94□□□□□ -1.78
BEST3Q8N1M1 AP003399.1-201ENST00000637534 361 ntBASIC3.94□□□□□ -1.78
BEST3Q8N1M1 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.94□□□□□ -1.78
BEST3Q8N1M1 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.94□□□□□ -1.78
BEST3Q8N1M1 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
BEST3Q8N1M1 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
BEST3Q8N1M1 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
BEST3Q8N1M1 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.94□□□□□ -1.78
BEST3Q8N1M1 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.94□□□□□ -1.78
BEST3Q8N1M1 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.93□□□□□ -1.78
BEST3Q8N1M1 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
BEST3Q8N1M1 AC130650.2-201ENST00000618736 2403 ntBASIC3.93□□□□□ -1.78
BEST3Q8N1M1 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
BEST3Q8N1M1 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
BEST3Q8N1M1 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
BEST3Q8N1M1 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
BEST3Q8N1M1 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.93□□□□□ -1.78
BEST3Q8N1M1 ENSAP1-201ENST00000392855 326 ntBASIC3.93□□□□□ -1.78
BEST3Q8N1M1 CYCSP45-201ENST00000402289 315 ntBASIC3.93□□□□□ -1.78
BEST3Q8N1M1 SNORA11-201ENST00000408789 128 ntBASIC3.93□□□□□ -1.78
BEST3Q8N1M1 MIR1911-201ENST00000410783 80 ntBASIC3.93□□□□□ -1.78
BEST3Q8N1M1 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.93□□□□□ -1.78
BEST3Q8N1M1 AC004987.3-201ENST00000413879 771 ntBASIC3.93□□□□□ -1.78
BEST3Q8N1M1 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.93□□□□□ -1.78
BEST3Q8N1M1 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.93□□□□□ -1.78
BEST3Q8N1M1 AL953862.1-201ENST00000423016 168 ntBASIC3.93□□□□□ -1.78
BEST3Q8N1M1 MTCYBP39-201ENST00000437562 491 ntBASIC3.93□□□□□ -1.78
BEST3Q8N1M1 AL353748.1-201ENST00000440753 474 ntBASIC3.93□□□□□ -1.78
BEST3Q8N1M1 AC104073.1-201ENST00000451988 151 ntBASIC3.93□□□□□ -1.78
BEST3Q8N1M1 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.93□□□□□ -1.78
BEST3Q8N1M1 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.93□□□□□ -1.78
BEST3Q8N1M1 AC097493.1-201ENST00000463958 372 ntBASIC3.93□□□□□ -1.78
BEST3Q8N1M1 AC087385.1-201ENST00000475062 312 ntBASIC3.93□□□□□ -1.78
BEST3Q8N1M1 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.93□□□□□ -1.78
BEST3Q8N1M1 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.93□□□□□ -1.78
BEST3Q8N1M1 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.93□□□□□ -1.78
BEST3Q8N1M1 AC005178.1-201ENST00000508392 440 ntBASIC3.93□□□□□ -1.78
BEST3Q8N1M1 AC006499.6-201ENST00000511169 607 ntBASIC3.93□□□□□ -1.78
BEST3Q8N1M1 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
BEST3Q8N1M1 OR5BM1P-201ENST00000512021 366 ntBASIC3.93□□□□□ -1.78
BEST3Q8N1M1 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.93□□□□□ -1.78
BEST3Q8N1M1 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.93□□□□□ -1.78
BEST3Q8N1M1 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.93□□□□□ -1.78
BEST3Q8N1M1 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.93□□□□□ -1.78
BEST3Q8N1M1 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.93□□□□□ -1.78
BEST3Q8N1M1 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.93□□□□□ -1.78
BEST3Q8N1M1 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.93□□□□□ -1.78
BEST3Q8N1M1 PTP4A1P6-201ENST00000531034 478 ntBASIC3.93□□□□□ -1.78
BEST3Q8N1M1 CYCSP2-201ENST00000558168 301 ntBASIC3.93□□□□□ -1.78
BEST3Q8N1M1 HSPE1P3-201ENST00000559254 309 ntBASIC3.93□□□□□ -1.78
BEST3Q8N1M1 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.93□□□□□ -1.78
BEST3Q8N1M1 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.93□□□□□ -1.78
BEST3Q8N1M1 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.93□□□□□ -1.78
BEST3Q8N1M1 AC020914.6-201ENST00000594327 272 ntBASIC3.93□□□□□ -1.78
BEST3Q8N1M1 AL596327.1-201ENST00000603629 213 ntBASIC3.93□□□□□ -1.78
BEST3Q8N1M1 AC007566.2-201ENST00000603642 413 ntBASIC3.93□□□□□ -1.78
BEST3Q8N1M1 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.93□□□□□ -1.78
BEST3Q8N1M1 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.93□□□□□ -1.78
BEST3Q8N1M1 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
BEST3Q8N1M1 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.93□□□□□ -1.78
BEST3Q8N1M1 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.93□□□□□ -1.78
BEST3Q8N1M1 AL031667.3-201ENST00000620124 655 ntBASIC3.93□□□□□ -1.78
BEST3Q8N1M1 AC079228.1-201ENST00000624774 1049 ntBASIC3.93□□□□□ -1.78
BEST3Q8N1M1 RNA5SP196-201ENST00000625967 102 ntBASIC3.93□□□□□ -1.78
BEST3Q8N1M1 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.93□□□□□ -1.78
BEST3Q8N1M1 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
BEST3Q8N1M1 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
BEST3Q8N1M1 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.93□□□□□ -1.78
BEST3Q8N1M1 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
BEST3Q8N1M1 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
BEST3Q8N1M1 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.92□□□□□ -1.78
BEST3Q8N1M1 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
BEST3Q8N1M1 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
BEST3Q8N1M1 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.92□□□□□ -1.78
BEST3Q8N1M1 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.92□□□□□ -1.78
BEST3Q8N1M1 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
BEST3Q8N1M1 AC067945.1-201ENST00000342609 618 ntBASIC3.92□□□□□ -1.78
BEST3Q8N1M1 SNORD74.4-201ENST00000364129 80 ntBASIC3.92□□□□□ -1.78
BEST3Q8N1M1 RNA5SP22-201ENST00000365393 109 ntBASIC3.92□□□□□ -1.78
BEST3Q8N1M1 AL024474.1-201ENST00000404655 591 ntBASIC3.92□□□□□ -1.78
BEST3Q8N1M1 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.92□□□□□ -1.78
BEST3Q8N1M1 RN7SKP182-201ENST00000410772 298 ntBASIC3.92□□□□□ -1.78
BEST3Q8N1M1 RN7SKP167-201ENST00000411047 285 ntBASIC3.92□□□□□ -1.78
BEST3Q8N1M1 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms