Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 MTND5P3-201ENST00000438536 1800 ntBASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 RNU2-21P-201ENST00000410368 188 ntBASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 TATDN1P1-201ENST00000414123 891 ntBASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 OR1AA1P-201ENST00000419597 916 ntBASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 RPL37P1-201ENST00000432310 284 ntBASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 AL050321.1-201ENST00000432363 400 ntBASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 AC023347.2-201ENST00000433994 462 ntBASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 ARL4AP4-201ENST00000434170 518 ntBASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 HMGB1P45-201ENST00000435986 653 ntBASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 AC005019.1-201ENST00000436455 431 ntBASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 CST9LP2-201ENST00000437612 320 ntBASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 AC105402.2-201ENST00000438503 358 ntBASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 ATP5C1P1-201ENST00000441945 895 ntBASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 AC092685.1-201ENST00000447960 1243 ntBASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 Z99127.3-201ENST00000448158 395 ntBASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 AL353718.1-201ENST00000451028 517 ntBASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 MTND2P30-201ENST00000456663 382 ntBASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 RPL21P10-201ENST00000463521 490 ntBASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 RPL37P6-202ENST00000464216 403 ntBASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 PLGLA-201ENST00000465668 449 ntBASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 AC006483.1-201ENST00000487308 313 ntBASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 RPL21P13-201ENST00000488305 481 ntBASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 RPL7P38-201ENST00000488396 739 ntBASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 MTND4LP22-201ENST00000508209 276 ntBASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 MTND2P31-201ENST00000512602 616 ntBASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 RNU4-60P-201ENST00000517239 135 ntBASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 AC139103.1-201ENST00000534696 1030 ntBASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 AC005951.1-201ENST00000576706 485 ntBASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 AL162713.1-201ENST00000604480 262 ntBASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 AL021368.1-201ENST00000607490 540 ntBASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 MTND5P27-201ENST00000428871 1720 ntBASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 AL122126.1-201ENST00000546905 1318 ntBASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC65Q8IXS2 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.65□□□□□ -1.82
CCDC65Q8IXS2 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.65□□□□□ -1.82
CCDC65Q8IXS2 AL136164.4-201ENST00000625013 2135 ntBASIC3.65□□□□□ -1.82
CCDC65Q8IXS2 MTND4P34-201ENST00000572715 1371 ntBASIC3.65□□□□□ -1.82
CCDC65Q8IXS2 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.65□□□□□ -1.82
CCDC65Q8IXS2 RNU1-70P-201ENST00000362618 164 ntBASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 RNU1-33P-201ENST00000364249 162 ntBASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 HNRNPDP2-201ENST00000406475 478 ntBASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 RNA5SP107-201ENST00000411358 122 ntBASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 VN1R42P-201ENST00000424651 344 ntBASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 RPL7P46-201ENST00000425129 740 ntBASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 AL590103.1-201ENST00000434488 307 ntBASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 AL590762.3-201ENST00000436372 640 ntBASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 MTND4P15-201ENST00000437913 1033 ntBASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 AC104308.1-201ENST00000454621 333 ntBASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 AC110792.2-201ENST00000510278 224 ntBASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 RN7SKP283-201ENST00000517197 270 ntBASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 AC083923.1-201ENST00000523708 376 ntBASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 AC011611.1-201ENST00000552179 197 ntBASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 AC012254.4-201ENST00000588843 273 ntBASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 AL671309.1-201ENST00000603750 544 ntBASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 AL392112.1-201ENST00000605115 829 ntBASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 AC107294.3-201ENST00000609211 526 ntBASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 AL157817.1-201ENST00000614264 790 ntBASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 FRG1HP-204ENST00000617940 757 ntBASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 AL163051.2-201ENST00000618976 735 ntBASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 AC073476.4-201ENST00000628409 72 ntBASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 AC117529.2-201ENST00000512159 2068 ntBASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 AC104446.1-201ENST00000613728 1321 ntBASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 MFSD8-213ENST00000641134 1327 ntBASIC3.65□□□□□ -1.83
CCDC65Q8IXS2 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms