Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 AL445435.1-201ENST00000604232 665 ntBASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 AC010680.4-201ENST00000605334 543 ntBASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 AP003117.2-201ENST00000606010 545 ntBASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 AC024060.1-201ENST00000607052 494 ntBASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 OR6R2P-201ENST00000609216 300 ntBASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 AC022960.3-201ENST00000619794 441 ntBASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 OR8B1P-202ENST00000641132 1178 ntBASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 OR6C71P-202ENST00000641886 1107 ntBASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 MTND5P28-201ENST00000438005 1594 ntBASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 RPS29P4-201ENST00000414733 161 ntBASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 RPL7P53-201ENST00000421245 739 ntBASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 AC009237.2-201ENST00000421358 284 ntBASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 AC069157.1-201ENST00000421749 137 ntBASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 AC233981.1-201ENST00000423224 461 ntBASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 RPP40P1-201ENST00000426762 456 ntBASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 FTH1P6-201ENST00000430768 320 ntBASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 SKP1P1-201ENST00000438081 489 ntBASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 RPS26P56-201ENST00000444468 240 ntBASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 AL358794.1-201ENST00000445689 381 ntBASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 HMGB3P8-201ENST00000449709 577 ntBASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 SNX5P1-201ENST00000505757 1041 ntBASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 FTH1P9-201ENST00000513251 355 ntBASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 RN7SKP157-201ENST00000516174 282 ntBASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 RNU6-579P-201ENST00000516879 102 ntBASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 RN7SKP277-201ENST00000516895 283 ntBASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 AP001207.2-201ENST00000519490 539 ntBASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 AC099489.2-201ENST00000574976 260 ntBASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 MIR3922-201ENST00000585192 84 ntBASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 AC006116.10-201ENST00000591836 581 ntBASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 AC115621.1-201ENST00000604653 858 ntBASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 AL592148.2-201ENST00000612210 372 ntBASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 AC016597.2-201ENST00000613256 341 ntBASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 AC068620.4-201ENST00000636730 1182 ntBASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 AC087821.2-201ENST00000637086 450 ntBASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 AC073073.2-201ENST00000609827 2578 ntBASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
C9orf40Q8IXQ3 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
C9orf40Q8IXQ3 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.3□□□□□ -1.88
C9orf40Q8IXQ3 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
C9orf40Q8IXQ3 AC000367.1-201ENST00000452711 1766 ntBASIC3.3□□□□□ -1.88
C9orf40Q8IXQ3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
C9orf40Q8IXQ3 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.3□□□□□ -1.88
C9orf40Q8IXQ3 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.3□□□□□ -1.88
C9orf40Q8IXQ3 TNPO1P3-201ENST00000436471 2662 ntBASIC3.3□□□□□ -1.88
C9orf40Q8IXQ3 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
C9orf40Q8IXQ3 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
C9orf40Q8IXQ3 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
C9orf40Q8IXQ3 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
C9orf40Q8IXQ3 RNU6-839P-201ENST00000363347 108 ntBASIC3.3□□□□□ -1.88
C9orf40Q8IXQ3 RNA5SP42-201ENST00000364278 115 ntBASIC3.3□□□□□ -1.88
C9orf40Q8IXQ3 RNU6-283P-201ENST00000364788 107 ntBASIC3.3□□□□□ -1.88
C9orf40Q8IXQ3 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
C9orf40Q8IXQ3 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
C9orf40Q8IXQ3 AL079342.2-201ENST00000403367 482 ntBASIC3.3□□□□□ -1.88
C9orf40Q8IXQ3 AL139098.1-201ENST00000407291 389 ntBASIC3.3□□□□□ -1.88
C9orf40Q8IXQ3 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.3□□□□□ -1.88
C9orf40Q8IXQ3 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.3□□□□□ -1.88
C9orf40Q8IXQ3 HMGN2P31-201ENST00000432430 273 ntBASIC3.3□□□□□ -1.88
C9orf40Q8IXQ3 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.3□□□□□ -1.88
C9orf40Q8IXQ3 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms