Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 Y_RNA.22-201ENST00000362492 102 ntBASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 RNU6-115P-201ENST00000364310 107 ntBASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 Y_RNA.237-201ENST00000364439 102 ntBASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 RNU6-744P-201ENST00000365557 107 ntBASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 RNU6-1316P-201ENST00000384242 108 ntBASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 MRPL53P1-201ENST00000414323 319 ntBASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 AL662874.1-201ENST00000426065 230 ntBASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 AC002381.1-201ENST00000447049 280 ntBASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 AL031659.1-201ENST00000447075 539 ntBASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 RPL23AP60-201ENST00000450011 454 ntBASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 AL162388.1-201ENST00000450912 352 ntBASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 OR2AQ1P-201ENST00000451972 200 ntBASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 LINC01399-202ENST00000458450 244 ntBASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 AC109481.1-201ENST00000509173 282 ntBASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 AC078899.1-201ENST00000521432 1185 ntBASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 CBX3P4-201ENST00000538909 354 ntBASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 RPL21P12-201ENST00000559810 515 ntBASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 MIR4703-201ENST00000577728 79 ntBASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 MIR1273E-201ENST00000581165 102 ntBASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 MAGOH2P-202ENST00000584384 429 ntBASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 AC105224.1-201ENST00000587055 421 ntBASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 AC119403.2-201ENST00000590960 598 ntBASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 AC002044.1-201ENST00000606707 158 ntBASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 AP001282.2-201ENST00000616149 309 ntBASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 AL450472.1-202ENST00000637286 180 ntBASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 AL662795.2-201ENST00000624252 3706 ntBASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
NPAS3Q8IXF0 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 AL139276.1-201ENST00000311910 1001 ntBASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 OR52E6-202ENST00000379946 954 ntBASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 SNORA70H-201ENST00000383910 135 ntBASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 SNORA70J-201ENST00000384182 135 ntBASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 RNU6-306P-201ENST00000384617 107 ntBASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 Y_RNA.551-201ENST00000384661 102 ntBASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 RNU6-55P-201ENST00000411092 107 ntBASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 AC096664.2-201ENST00000411843 406 ntBASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 AC012065.2-201ENST00000421295 375 ntBASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 AL355433.1-201ENST00000422804 300 ntBASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 AC007568.1-201ENST00000422912 471 ntBASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 AC093716.1-201ENST00000435923 377 ntBASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 LAMTOR5P1-201ENST00000444290 270 ntBASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 AL163193.1-201ENST00000444895 788 ntBASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 EEF1B2P6-201ENST00000445713 673 ntBASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 RPL9P32-201ENST00000464118 620 ntBASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 TMEM251P1-201ENST00000503717 318 ntBASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 CBX3P8-201ENST00000532412 525 ntBASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 SUMO2P15-201ENST00000604285 278 ntBASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 AC093297.3-201ENST00000607056 2517 ntBASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NPAS3Q8IXF0 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms