Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 THAP12P4-201ENST00000528321 2266 ntBASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
TRIM48Q8IWZ4 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 RNU6-1322P-201ENST00000364309 107 ntBASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 RNA5SP455-201ENST00000365190 119 ntBASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 SNORA20.2-201ENST00000383922 131 ntBASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 RNU6-116P-201ENST00000384042 109 ntBASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 RNU1-74P-201ENST00000384108 171 ntBASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 BTBD10P2-201ENST00000404779 676 ntBASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 MTATP6P18-201ENST00000417994 673 ntBASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 AC008850.1-201ENST00000427546 362 ntBASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 RPL12P3-201ENST00000440080 396 ntBASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 TRBV26-201ENST00000456572 344 ntBASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 RPS20P20-201ENST00000460498 340 ntBASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 PLGLA-201ENST00000465668 449 ntBASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 AC087879.1-201ENST00000474343 374 ntBASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 RN7SL826P-201ENST00000479724 288 ntBASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 AC005726.1-201ENST00000494679 427 ntBASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 PANCR-202ENST00000513690 448 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 Y_RNA.675-201ENST00000516389 149 ntBASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 RNU6-1220P-201ENST00000517126 108 ntBASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 AP000676.2-201ENST00000529711 301 ntBASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 OR5AL2P-201ENST00000532185 920 ntBASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 AC009101.1-201ENST00000568135 242 ntBASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 RPS3AP23-202ENST00000574601 686 ntBASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 AC121334.2-201ENST00000605387 271 ntBASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 AL136221.1-201ENST00000621449 509 ntBASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 AL353662.3-201ENST00000625131 237 ntBASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 MAPK10-263ENST00000641052 4307 ntBASIC5.03□□□□□ -1.6
TRIM48Q8IWZ4 AC011755.1-201ENST00000623763 2049 ntBASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 AC092079.1-201ENST00000558620 1985 ntBASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 ZNF680P1-201ENST00000436625 1469 ntBASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 RNU6-28P-201ENST00000362378 107 ntBASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 Y_RNA.142-201ENST00000363491 102 ntBASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 RNY3P3-201ENST00000363816 102 ntBASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 RN7SKP113-201ENST00000363891 295 ntBASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 RNU1-39P-201ENST00000383897 165 ntBASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 OR9R1P-201ENST00000412200 877 ntBASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 MTCO2P5-201ENST00000422621 426 ntBASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 AC104837.2-201ENST00000427236 424 ntBASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 OR2B7P-201ENST00000429302 934 ntBASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 RBMY2QP-201ENST00000429799 1147 ntBASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 AL606489.2-201ENST00000433886 234 ntBASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 BNIP3P2-201ENST00000441221 577 ntBASIC5.02□□□□□ -1.61
TRIM48Q8IWZ4 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms