Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.32□□□□□ -1.88
CDKL3Q8IVW4 OR1AA1P-201ENST00000419597 916 ntBASIC3.32□□□□□ -1.88
CDKL3Q8IVW4 CR848007.2-201ENST00000424918 787 ntBASIC3.32□□□□□ -1.88
CDKL3Q8IVW4 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.32□□□□□ -1.88
CDKL3Q8IVW4 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.32□□□□□ -1.88
CDKL3Q8IVW4 MTND4LP14-201ENST00000429447 288 ntBASIC3.32□□□□□ -1.88
CDKL3Q8IVW4 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.32□□□□□ -1.88
CDKL3Q8IVW4 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.32□□□□□ -1.88
CDKL3Q8IVW4 GOT2P5-201ENST00000433995 546 ntBASIC3.32□□□□□ -1.88
CDKL3Q8IVW4 B3GNT2P1-201ENST00000434960 952 ntBASIC3.32□□□□□ -1.88
CDKL3Q8IVW4 AC005019.1-201ENST00000436455 431 ntBASIC3.32□□□□□ -1.88
CDKL3Q8IVW4 PDSS1P2-201ENST00000449397 678 ntBASIC3.32□□□□□ -1.88
CDKL3Q8IVW4 ST13P14-201ENST00000474095 734 ntBASIC3.32□□□□□ -1.88
CDKL3Q8IVW4 OR5H3P-201ENST00000502817 919 ntBASIC3.32□□□□□ -1.88
CDKL3Q8IVW4 KCTD9P5-201ENST00000504141 1170 ntBASIC3.32□□□□□ -1.88
CDKL3Q8IVW4 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.32□□□□□ -1.88
CDKL3Q8IVW4 AC006499.5-201ENST00000505037 514 ntBASIC3.32□□□□□ -1.88
CDKL3Q8IVW4 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.32□□□□□ -1.88
CDKL3Q8IVW4 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.32□□□□□ -1.88
CDKL3Q8IVW4 AC008562.1-201ENST00000521763 330 ntBASIC3.32□□□□□ -1.88
CDKL3Q8IVW4 AC026616.1-201ENST00000523157 525 ntBASIC3.32□□□□□ -1.88
CDKL3Q8IVW4 AC008739.3-201ENST00000603262 127 ntBASIC3.32□□□□□ -1.88
CDKL3Q8IVW4 AL451074.6-201ENST00000608512 729 ntBASIC3.32□□□□□ -1.88
CDKL3Q8IVW4 AC104307.1-201ENST00000616142 196 ntBASIC3.32□□□□□ -1.88
CDKL3Q8IVW4 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDKL3Q8IVW4 AC009501.3-201ENST00000605001 1352 ntBASIC3.32□□□□□ -1.88
CDKL3Q8IVW4 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.32□□□□□ -1.88
CDKL3Q8IVW4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDKL3Q8IVW4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.32□□□□□ -1.88
CDKL3Q8IVW4 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.31□□□□□ -1.88
CDKL3Q8IVW4 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CDKL3Q8IVW4 AC110774.1-201ENST00000623567 2018 ntBASIC3.31□□□□□ -1.88
CDKL3Q8IVW4 METTL21EP-201ENST00000298105 713 ntBASIC3.31□□□□□ -1.88
CDKL3Q8IVW4 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CDKL3Q8IVW4 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CDKL3Q8IVW4 RNU1-33P-201ENST00000364249 162 ntBASIC3.31□□□□□ -1.88
CDKL3Q8IVW4 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDKL3Q8IVW4 MIR449B-201ENST00000384995 97 ntBASIC3.31□□□□□ -1.88
CDKL3Q8IVW4 HMGN1P24-201ENST00000412282 298 ntBASIC3.31□□□□□ -1.88
CDKL3Q8IVW4 AC007899.1-201ENST00000412776 775 ntBASIC3.31□□□□□ -1.88
CDKL3Q8IVW4 HMGB3P23-201ENST00000414981 585 ntBASIC3.31□□□□□ -1.88
CDKL3Q8IVW4 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.31□□□□□ -1.88
CDKL3Q8IVW4 DPPA2P1-201ENST00000428060 556 ntBASIC3.31□□□□□ -1.88
CDKL3Q8IVW4 AC006946.1-201ENST00000429106 328 ntBASIC3.31□□□□□ -1.88
CDKL3Q8IVW4 AL050321.1-201ENST00000432363 400 ntBASIC3.31□□□□□ -1.88
CDKL3Q8IVW4 RPL7P29-201ENST00000437151 728 ntBASIC3.31□□□□□ -1.88
CDKL3Q8IVW4 XKRY2-201ENST00000442362 1093 ntBASIC3.31□□□□□ -1.88
CDKL3Q8IVW4 AL590399.6-201ENST00000446396 307 ntBASIC3.31□□□□□ -1.88
CDKL3Q8IVW4 RPL7P59-201ENST00000447700 943 ntBASIC3.31□□□□□ -1.88
CDKL3Q8IVW4 MTND2P3-201ENST00000452458 470 ntBASIC3.31□□□□□ -1.88
CDKL3Q8IVW4 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.31□□□□□ -1.88
CDKL3Q8IVW4 AC073522.1-201ENST00000483312 377 ntBASIC3.31□□□□□ -1.88
CDKL3Q8IVW4 OR9N1P-202ENST00000494289 481 ntBASIC3.31□□□□□ -1.88
CDKL3Q8IVW4 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.31□□□□□ -1.88
CDKL3Q8IVW4 MTCYBP41-201ENST00000528913 1123 ntBASIC3.31□□□□□ -1.88
CDKL3Q8IVW4 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.31□□□□□ -1.88
CDKL3Q8IVW4 AC074029.1-201ENST00000552531 1044 ntBASIC3.31□□□□□ -1.88
CDKL3Q8IVW4 AL355802.4-201ENST00000607635 548 ntBASIC3.31□□□□□ -1.88
CDKL3Q8IVW4 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.31□□□□□ -1.88
CDKL3Q8IVW4 FAM157B-203ENST00000639350 358 ntBASIC3.31□□□□□ -1.88
CDKL3Q8IVW4 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDKL3Q8IVW4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CDKL3Q8IVW4 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.31□□□□□ -1.88
CDKL3Q8IVW4 AC116096.1-201ENST00000566804 2314 ntBASIC3.31□□□□□ -1.88
CDKL3Q8IVW4 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CDKL3Q8IVW4 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 SNORA71.3-201ENST00000362582 128 ntBASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 OR6K3-202ENST00000368146 996 ntBASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 RNU6-98P-201ENST00000384173 107 ntBASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 RNU6-883P-201ENST00000384597 107 ntBASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 MIR490-201ENST00000384865 128 ntBASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 NUP35P2-201ENST00000416748 943 ntBASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 RPS15AP40-201ENST00000419621 391 ntBASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 RPL37P1-201ENST00000432310 284 ntBASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 RSL24D1P8-201ENST00000434442 492 ntBASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 TPRKBP1-201ENST00000456243 481 ntBASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 snoU13.22-201ENST00000459428 104 ntBASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 RPS27P29-201ENST00000463110 252 ntBASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 RPL5P24-201ENST00000463742 885 ntBASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 AC021146.5-201ENST00000503544 545 ntBASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 AC114967.1-201ENST00000504890 259 ntBASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 AC021678.1-201ENST00000505195 936 ntBASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
CDKL3Q8IVW4 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms