Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.81
C11orf88Q6PI97 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
C11orf88Q6PI97 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.81
C11orf88Q6PI97 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.71□□□□□ -1.81
C11orf88Q6PI97 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
C11orf88Q6PI97 OR5H2-201ENST00000355273 945 ntBASIC3.71□□□□□ -1.82
C11orf88Q6PI97 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
C11orf88Q6PI97 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
C11orf88Q6PI97 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.71□□□□□ -1.82
C11orf88Q6PI97 Y_RNA.408-201ENST00000383987 102 ntBASIC3.71□□□□□ -1.82
C11orf88Q6PI97 AL356967.1-201ENST00000406305 431 ntBASIC3.71□□□□□ -1.82
C11orf88Q6PI97 MIR1911-201ENST00000410783 80 ntBASIC3.71□□□□□ -1.82
C11orf88Q6PI97 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.71□□□□□ -1.82
C11orf88Q6PI97 NRBF2P2-201ENST00000413087 861 ntBASIC3.71□□□□□ -1.82
C11orf88Q6PI97 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.71□□□□□ -1.82
C11orf88Q6PI97 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.71□□□□□ -1.82
C11orf88Q6PI97 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
C11orf88Q6PI97 RPL23AP1-201ENST00000428990 471 ntBASIC3.71□□□□□ -1.82
C11orf88Q6PI97 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.71□□□□□ -1.82
C11orf88Q6PI97 HMGN2P20-201ENST00000437531 273 ntBASIC3.71□□□□□ -1.82
C11orf88Q6PI97 RPL23AP52-201ENST00000439311 478 ntBASIC3.71□□□□□ -1.82
C11orf88Q6PI97 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.71□□□□□ -1.82
C11orf88Q6PI97 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.71□□□□□ -1.82
C11orf88Q6PI97 RPL17P49-201ENST00000443728 411 ntBASIC3.71□□□□□ -1.82
C11orf88Q6PI97 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.71□□□□□ -1.82
C11orf88Q6PI97 AC108463.1-201ENST00000450258 347 ntBASIC3.71□□□□□ -1.82
C11orf88Q6PI97 Z82190.1-201ENST00000454534 490 ntBASIC3.71□□□□□ -1.82
C11orf88Q6PI97 RPL12P20-201ENST00000475538 479 ntBASIC3.71□□□□□ -1.82
C11orf88Q6PI97 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
C11orf88Q6PI97 RN7SL812P-201ENST00000493791 279 ntBASIC3.71□□□□□ -1.82
C11orf88Q6PI97 RPL36AP41-201ENST00000493820 306 ntBASIC3.71□□□□□ -1.82
C11orf88Q6PI97 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
C11orf88Q6PI97 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC3.71□□□□□ -1.82
C11orf88Q6PI97 RN7SKP31-201ENST00000516354 278 ntBASIC3.71□□□□□ -1.82
C11orf88Q6PI97 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.71□□□□□ -1.82
C11orf88Q6PI97 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
C11orf88Q6PI97 SLC2A13P1-201ENST00000531560 322 ntBASIC3.71□□□□□ -1.82
C11orf88Q6PI97 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
C11orf88Q6PI97 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.71□□□□□ -1.82
C11orf88Q6PI97 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.71□□□□□ -1.82
C11orf88Q6PI97 AL163153.1-201ENST00000554223 283 ntBASIC3.71□□□□□ -1.82
C11orf88Q6PI97 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.71□□□□□ -1.82
C11orf88Q6PI97 AC105129.1-201ENST00000560250 297 ntBASIC3.71□□□□□ -1.82
C11orf88Q6PI97 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.71□□□□□ -1.82
C11orf88Q6PI97 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.71□□□□□ -1.82
C11orf88Q6PI97 AL022099.1-201ENST00000604551 712 ntBASIC3.71□□□□□ -1.82
C11orf88Q6PI97 AL133243.1-201ENST00000614487 366 ntBASIC3.71□□□□□ -1.82
C11orf88Q6PI97 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.71□□□□□ -1.82
C11orf88Q6PI97 AC069209.1-201ENST00000619282 651 ntBASIC3.71□□□□□ -1.82
C11orf88Q6PI97 AC004009.2-201ENST00000623016 728 ntBASIC3.71□□□□□ -1.82
C11orf88Q6PI97 AC019278.1-201ENST00000623516 479 ntBASIC3.71□□□□□ -1.82
C11orf88Q6PI97 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.71□□□□□ -1.82
C11orf88Q6PI97 U3.53-201ENST00000628922 216 ntBASIC3.71□□□□□ -1.82
C11orf88Q6PI97 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.71□□□□□ -1.82
C11orf88Q6PI97 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.71□□□□□ -1.82
C11orf88Q6PI97 AL136164.4-201ENST00000625013 2135 ntBASIC3.71□□□□□ -1.82
C11orf88Q6PI97 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.71□□□□□ -1.82
C11orf88Q6PI97 LINC00622-201ENST00000562811 1570 ntBASIC3.71□□□□□ -1.82
C11orf88Q6PI97 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
C11orf88Q6PI97 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
C11orf88Q6PI97 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
C11orf88Q6PI97 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.7□□□□□ -1.82
C11orf88Q6PI97 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
C11orf88Q6PI97 RNU5E-10P-201ENST00000363506 118 ntBASIC3.7□□□□□ -1.82
C11orf88Q6PI97 RN7SKP227-201ENST00000364445 330 ntBASIC3.7□□□□□ -1.82
C11orf88Q6PI97 MIR122-201ENST00000385044 85 ntBASIC3.7□□□□□ -1.82
C11orf88Q6PI97 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.7□□□□□ -1.82
C11orf88Q6PI97 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.7□□□□□ -1.82
C11orf88Q6PI97 AC009237.5-201ENST00000414271 501 ntBASIC3.7□□□□□ -1.82
C11orf88Q6PI97 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.7□□□□□ -1.82
C11orf88Q6PI97 MTATP6P27-201ENST00000416987 621 ntBASIC3.7□□□□□ -1.82
C11orf88Q6PI97 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.7□□□□□ -1.82
C11orf88Q6PI97 EIF1P3-201ENST00000423841 334 ntBASIC3.7□□□□□ -1.82
C11orf88Q6PI97 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.7□□□□□ -1.82
C11orf88Q6PI97 RPS12P10-201ENST00000427031 377 ntBASIC3.7□□□□□ -1.82
C11orf88Q6PI97 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.7□□□□□ -1.82
C11orf88Q6PI97 MTND2P5-201ENST00000432656 1006 ntBASIC3.7□□□□□ -1.82
C11orf88Q6PI97 AC091390.1-201ENST00000433904 331 ntBASIC3.7□□□□□ -1.82
C11orf88Q6PI97 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.7□□□□□ -1.82
C11orf88Q6PI97 RPL23AP76-201ENST00000441860 458 ntBASIC3.7□□□□□ -1.82
C11orf88Q6PI97 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.7□□□□□ -1.82
C11orf88Q6PI97 ABCF2P2-201ENST00000450549 296 ntBASIC3.7□□□□□ -1.82
C11orf88Q6PI97 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.7□□□□□ -1.82
C11orf88Q6PI97 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.7□□□□□ -1.82
C11orf88Q6PI97 snoU109.3-201ENST00000459477 145 ntBASIC3.7□□□□□ -1.82
C11orf88Q6PI97 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.7□□□□□ -1.82
C11orf88Q6PI97 AC113420.1-201ENST00000507903 571 ntBASIC3.7□□□□□ -1.82
C11orf88Q6PI97 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.7□□□□□ -1.82
C11orf88Q6PI97 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.7□□□□□ -1.82
C11orf88Q6PI97 AC105914.1-201ENST00000511798 226 ntBASIC3.7□□□□□ -1.82
C11orf88Q6PI97 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.7□□□□□ -1.82
C11orf88Q6PI97 AC022861.1-201ENST00000522981 663 ntBASIC3.7□□□□□ -1.82
C11orf88Q6PI97 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.7□□□□□ -1.82
C11orf88Q6PI97 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.7□□□□□ -1.82
C11orf88Q6PI97 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.7□□□□□ -1.82
C11orf88Q6PI97 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.7□□□□□ -1.82
C11orf88Q6PI97 CR383656.7-201ENST00000548164 174 ntBASIC3.7□□□□□ -1.82
C11orf88Q6PI97 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.7□□□□□ -1.82
C11orf88Q6PI97 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.7□□□□□ -1.82
C11orf88Q6PI97 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms