Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF43Q68DV7 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF43Q68DV7 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF43Q68DV7 AL137141.1-201ENST00000624622 4836 ntBASIC5.73□□□□□ -1.49
RNF43Q68DV7 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.73□□□□□ -1.49
RNF43Q68DV7 AC117470.1-201ENST00000381974 330 ntBASIC5.73□□□□□ -1.49
RNF43Q68DV7 SNORA20.2-201ENST00000383922 131 ntBASIC5.73□□□□□ -1.49
RNF43Q68DV7 Y_RNA.557-201ENST00000384680 107 ntBASIC5.73□□□□□ -1.49
RNF43Q68DV7 AL121834.1-202ENST00000404494 277 ntBASIC5.73□□□□□ -1.49
RNF43Q68DV7 BTBD10P2-201ENST00000404779 676 ntBASIC5.73□□□□□ -1.49
RNF43Q68DV7 RNA5SP498-201ENST00000411342 120 ntBASIC5.73□□□□□ -1.49
RNF43Q68DV7 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF43Q68DV7 AL049734.2-201ENST00000441066 616 ntBASIC5.73□□□□□ -1.49
RNF43Q68DV7 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC5.73□□□□□ -1.49
RNF43Q68DV7 AL935212.3-201ENST00000450729 284 ntBASIC5.73□□□□□ -1.49
RNF43Q68DV7 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.73□□□□□ -1.49
RNF43Q68DV7 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.73□□□□□ -1.49
RNF43Q68DV7 RPL7P15-201ENST00000461190 712 ntBASIC5.73□□□□□ -1.49
RNF43Q68DV7 RN7SL51P-201ENST00000468230 285 ntBASIC5.73□□□□□ -1.49
RNF43Q68DV7 AC072052.1-201ENST00000496556 306 ntBASIC5.73□□□□□ -1.49
RNF43Q68DV7 MTCO1P29-201ENST00000496868 288 ntBASIC5.73□□□□□ -1.49
RNF43Q68DV7 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.73□□□□□ -1.49
RNF43Q68DV7 HMGB1P41-201ENST00000520234 440 ntBASIC5.73□□□□□ -1.49
RNF43Q68DV7 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.73□□□□□ -1.49
RNF43Q68DV7 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.73□□□□□ -1.49
RNF43Q68DV7 APOOP3-201ENST00000536787 586 ntBASIC5.73□□□□□ -1.49
RNF43Q68DV7 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.73□□□□□ -1.49
RNF43Q68DV7 LSM3P2-201ENST00000551246 273 ntBASIC5.73□□□□□ -1.49
RNF43Q68DV7 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC5.73□□□□□ -1.49
RNF43Q68DV7 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.73□□□□□ -1.49
RNF43Q68DV7 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.73□□□□□ -1.49
RNF43Q68DV7 SS18L2P2-201ENST00000583960 235 ntBASIC5.73□□□□□ -1.49
RNF43Q68DV7 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.73□□□□□ -1.49
RNF43Q68DV7 AC008782.1-201ENST00000603386 430 ntBASIC5.73□□□□□ -1.49
RNF43Q68DV7 AC011468.4-201ENST00000603942 409 ntBASIC5.73□□□□□ -1.49
RNF43Q68DV7 AL139124.1-201ENST00000609123 421 ntBASIC5.73□□□□□ -1.49
RNF43Q68DV7 AC132068.1-201ENST00000623805 459 ntBASIC5.73□□□□□ -1.49
RNF43Q68DV7 AP001784.1-201ENST00000624107 428 ntBASIC5.73□□□□□ -1.49
RNF43Q68DV7 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RNF43Q68DV7 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
RNF43Q68DV7 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.73□□□□□ -1.49
RNF43Q68DV7 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.73□□□□□ -1.49
RNF43Q68DV7 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
RNF43Q68DV7 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.73□□□□□ -1.49
RNF43Q68DV7 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.73□□□□□ -1.49
RNF43Q68DV7 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RNF43Q68DV7 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RNF43Q68DV7 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
RNF43Q68DV7 AC125336.1-201ENST00000508893 2827 ntBASIC5.72□□□□□ -1.49
RNF43Q68DV7 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
RNF43Q68DV7 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF43Q68DV7 AC090337.1-201ENST00000579651 2074 ntBASIC5.72□□□□□ -1.49
RNF43Q68DV7 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF43Q68DV7 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF43Q68DV7 RNU1-35P-201ENST00000362782 153 ntBASIC5.72□□□□□ -1.49
RNF43Q68DV7 RNU6-379P-201ENST00000363813 104 ntBASIC5.72□□□□□ -1.49
RNF43Q68DV7 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF43Q68DV7 RNU6-1026P-201ENST00000384465 108 ntBASIC5.72□□□□□ -1.49
RNF43Q68DV7 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
RNF43Q68DV7 RPL23AP30-201ENST00000432419 501 ntBASIC5.72□□□□□ -1.49
RNF43Q68DV7 PRPF38AP2-201ENST00000438179 851 ntBASIC5.72□□□□□ -1.49
RNF43Q68DV7 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.72□□□□□ -1.49
RNF43Q68DV7 AC104651.2-201ENST00000447549 528 ntBASIC5.72□□□□□ -1.49
RNF43Q68DV7 RN7SL97P-201ENST00000486780 299 ntBASIC5.72□□□□□ -1.49
RNF43Q68DV7 AC106872.2-201ENST00000494303 480 ntBASIC5.72□□□□□ -1.49
RNF43Q68DV7 AC025164.1-201ENST00000496249 478 ntBASIC5.72□□□□□ -1.49
RNF43Q68DV7 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.72□□□□□ -1.49
RNF43Q68DV7 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF43Q68DV7 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RNF43Q68DV7 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RNF43Q68DV7 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC5.72□□□□□ -1.49
RNF43Q68DV7 AC137627.1-201ENST00000545761 289 ntBASIC5.72□□□□□ -1.49
RNF43Q68DV7 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RNF43Q68DV7 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.72□□□□□ -1.49
RNF43Q68DV7 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC5.72□□□□□ -1.49
RNF43Q68DV7 MIR7853-201ENST00000584820 132 ntBASIC5.72□□□□□ -1.49
RNF43Q68DV7 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.72□□□□□ -1.49
RNF43Q68DV7 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC5.72□□□□□ -1.49
RNF43Q68DV7 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.72□□□□□ -1.49
RNF43Q68DV7 AC090525.3-201ENST00000605601 189 ntBASIC5.72□□□□□ -1.49
RNF43Q68DV7 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.72□□□□□ -1.49
RNF43Q68DV7 AC100827.5-201ENST00000615883 426 ntBASIC5.72□□□□□ -1.49
RNF43Q68DV7 AC023509.5-201ENST00000617434 807 ntBASIC5.72□□□□□ -1.49
RNF43Q68DV7 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
RNF43Q68DV7 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.72□□□□□ -1.49
RNF43Q68DV7 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RNF43Q68DV7 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF43Q68DV7 AC090017.1-201ENST00000548612 1779 ntBASIC5.72□□□□□ -1.49
RNF43Q68DV7 AC023421.1-201ENST00000590535 1785 ntBASIC5.72□□□□□ -1.49
RNF43Q68DV7 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF43Q68DV7 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.72□□□□□ -1.49
RNF43Q68DV7 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.72□□□□□ -1.49
RNF43Q68DV7 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.49
RNF43Q68DV7 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
RNF43Q68DV7 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.71□□□□□ -1.49
RNF43Q68DV7 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
RNF43Q68DV7 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RNF43Q68DV7 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
RNF43Q68DV7 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RNF43Q68DV7 TAB3P1-202ENST00000452645 1634 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms