Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.55□□□□□ -1.68
RNF220Q5VTB9 PRPF38AP2-201ENST00000438179 851 ntBASIC4.55□□□□□ -1.68
RNF220Q5VTB9 AC004938.1-201ENST00000438468 308 ntBASIC4.55□□□□□ -1.68
RNF220Q5VTB9 AL451050.1-201ENST00000450126 415 ntBASIC4.55□□□□□ -1.68
RNF220Q5VTB9 RPS20P32-201ENST00000456044 356 ntBASIC4.55□□□□□ -1.68
RNF220Q5VTB9 RN7SL558P-201ENST00000497468 299 ntBASIC4.55□□□□□ -1.68
RNF220Q5VTB9 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.55□□□□□ -1.68
RNF220Q5VTB9 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
RNF220Q5VTB9 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
RNF220Q5VTB9 AC108064.1-201ENST00000513791 460 ntBASIC4.55□□□□□ -1.68
RNF220Q5VTB9 MTCO2P32-201ENST00000514865 403 ntBASIC4.55□□□□□ -1.68
RNF220Q5VTB9 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RNF220Q5VTB9 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.55□□□□□ -1.68
RNF220Q5VTB9 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.55□□□□□ -1.68
RNF220Q5VTB9 AP002748.2-201ENST00000528671 348 ntBASIC4.55□□□□□ -1.68
RNF220Q5VTB9 AC022878.1-201ENST00000530684 149 ntBASIC4.55□□□□□ -1.68
RNF220Q5VTB9 AC092490.3-201ENST00000545370 572 ntBASIC4.55□□□□□ -1.68
RNF220Q5VTB9 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.55□□□□□ -1.68
RNF220Q5VTB9 SETP2-201ENST00000553886 926 ntBASIC4.55□□□□□ -1.68
RNF220Q5VTB9 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.55□□□□□ -1.68
RNF220Q5VTB9 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.55□□□□□ -1.68
RNF220Q5VTB9 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.55□□□□□ -1.68
RNF220Q5VTB9 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.55□□□□□ -1.68
RNF220Q5VTB9 AL627230.1-201ENST00000613077 211 ntBASIC4.55□□□□□ -1.68
RNF220Q5VTB9 AC100793.4-201ENST00000613683 429 ntBASIC4.55□□□□□ -1.68
RNF220Q5VTB9 AC026368.1-201ENST00000614934 690 ntBASIC4.55□□□□□ -1.68
RNF220Q5VTB9 AL591926.8-201ENST00000616876 211 ntBASIC4.55□□□□□ -1.68
RNF220Q5VTB9 AC098679.4-201ENST00000624241 654 ntBASIC4.55□□□□□ -1.68
RNF220Q5VTB9 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.55□□□□□ -1.68
RNF220Q5VTB9 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
RNF220Q5VTB9 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.55□□□□□ -1.68
RNF220Q5VTB9 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RNF220Q5VTB9 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RNF220Q5VTB9 AC090337.1-201ENST00000579651 2074 ntBASIC4.55□□□□□ -1.68
RNF220Q5VTB9 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
RNF220Q5VTB9 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RNF220Q5VTB9 AC012020.1-201ENST00000624541 1728 ntBASIC4.55□□□□□ -1.68
RNF220Q5VTB9 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF220Q5VTB9 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF220Q5VTB9 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF220Q5VTB9 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF220Q5VTB9 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.54□□□□□ -1.68
RNF220Q5VTB9 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.54□□□□□ -1.68
RNF220Q5VTB9 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
RNF220Q5VTB9 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF220Q5VTB9 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
RNF220Q5VTB9 OR5H15-201ENST00000383696 930 ntBASIC4.54□□□□□ -1.68
RNF220Q5VTB9 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RNF220Q5VTB9 MIR708-201ENST00000390708 88 ntBASIC4.54□□□□□ -1.68
RNF220Q5VTB9 SNORA11.3-201ENST00000408471 128 ntBASIC4.54□□□□□ -1.68
RNF220Q5VTB9 AL663109.1-201ENST00000411498 844 ntBASIC4.54□□□□□ -1.68
RNF220Q5VTB9 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.54□□□□□ -1.68
RNF220Q5VTB9 NANOGP6-201ENST00000429190 847 ntBASIC4.54□□□□□ -1.68
RNF220Q5VTB9 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.54□□□□□ -1.68
RNF220Q5VTB9 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.54□□□□□ -1.68
RNF220Q5VTB9 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.54□□□□□ -1.68
RNF220Q5VTB9 AC108734.1-201ENST00000439549 399 ntBASIC4.54□□□□□ -1.68
RNF220Q5VTB9 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.54□□□□□ -1.68
RNF220Q5VTB9 AC016724.1-201ENST00000453215 421 ntBASIC4.54□□□□□ -1.68
RNF220Q5VTB9 Z82190.1-201ENST00000454534 490 ntBASIC4.54□□□□□ -1.68
RNF220Q5VTB9 AP1S2P1-201ENST00000457344 379 ntBASIC4.54□□□□□ -1.68
RNF220Q5VTB9 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RNF220Q5VTB9 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.54□□□□□ -1.68
RNF220Q5VTB9 AC021382.1-201ENST00000483523 359 ntBASIC4.54□□□□□ -1.68
RNF220Q5VTB9 RPS4XP14-201ENST00000493072 781 ntBASIC4.54□□□□□ -1.68
RNF220Q5VTB9 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.54□□□□□ -1.68
RNF220Q5VTB9 HIGD1AP14-201ENST00000507617 282 ntBASIC4.54□□□□□ -1.68
RNF220Q5VTB9 PAICSP4-201ENST00000517543 1253 ntBASIC4.54□□□□□ -1.68
RNF220Q5VTB9 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.54□□□□□ -1.68
RNF220Q5VTB9 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.54□□□□□ -1.68
RNF220Q5VTB9 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RNF220Q5VTB9 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.54□□□□□ -1.68
RNF220Q5VTB9 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.54□□□□□ -1.68
RNF220Q5VTB9 OR11J2P-201ENST00000555298 907 ntBASIC4.54□□□□□ -1.68
RNF220Q5VTB9 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.54□□□□□ -1.68
RNF220Q5VTB9 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.54□□□□□ -1.68
RNF220Q5VTB9 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.54□□□□□ -1.68
RNF220Q5VTB9 AC034268.2-201ENST00000571784 482 ntBASIC4.54□□□□□ -1.68
RNF220Q5VTB9 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.54□□□□□ -1.68
RNF220Q5VTB9 BNIP3P8-201ENST00000597863 560 ntBASIC4.54□□□□□ -1.68
RNF220Q5VTB9 AL139286.2-201ENST00000606838 396 ntBASIC4.54□□□□□ -1.68
RNF220Q5VTB9 AC022467.1-201ENST00000614738 749 ntBASIC4.54□□□□□ -1.68
RNF220Q5VTB9 AL590099.1-201ENST00000615276 138 ntBASIC4.54□□□□□ -1.68
RNF220Q5VTB9 AC104010.1-201ENST00000616889 150 ntBASIC4.54□□□□□ -1.68
RNF220Q5VTB9 AC108479.2-201ENST00000617314 601 ntBASIC4.54□□□□□ -1.68
RNF220Q5VTB9 SNORA11.6-201ENST00000619030 128 ntBASIC4.54□□□□□ -1.68
RNF220Q5VTB9 AC018755.4-201ENST00000619715 454 ntBASIC4.54□□□□□ -1.68
RNF220Q5VTB9 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.54□□□□□ -1.68
RNF220Q5VTB9 AC019206.1-201ENST00000621938 425 ntBASIC4.54□□□□□ -1.68
RNF220Q5VTB9 AL603839.4-201ENST00000624658 1005 ntBASIC4.54□□□□□ -1.68
RNF220Q5VTB9 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF220Q5VTB9 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RNF220Q5VTB9 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RNF220Q5VTB9 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF220Q5VTB9 TEX21P-201ENST00000447107 1476 ntBASIC4.54□□□□□ -1.68
RNF220Q5VTB9 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF220Q5VTB9 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RNF220Q5VTB9 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF220Q5VTB9 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF220Q5VTB9 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms