Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 OR7M1P-201ENST00000608946 533 ntBASIC2.6□□□□□ -1.99
RIF1Q5UIP0 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RIF1Q5UIP0 AC019072.1-201ENST00000604535 1551 ntBASIC2.59□□□□□ -1.99
RIF1Q5UIP0 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RIF1Q5UIP0 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC2.59□□□□□ -1.99
RIF1Q5UIP0 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RIF1Q5UIP0 RNA5SP322-201ENST00000363617 119 ntBASIC2.59□□□□□ -1.99
RIF1Q5UIP0 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.59□□□□□ -1.99
RIF1Q5UIP0 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.59□□□□□ -1.99
RIF1Q5UIP0 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC2.59□□□□□ -1.99
RIF1Q5UIP0 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC2.59□□□□□ -1.99
RIF1Q5UIP0 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC2.59□□□□□ -1.99
RIF1Q5UIP0 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.59□□□□□ -1.99
RIF1Q5UIP0 NPM1P49-201ENST00000448027 714 ntBASIC2.59□□□□□ -1.99
RIF1Q5UIP0 AP003102.1-201ENST00000525638 661 ntBASIC2.59□□□□□ -1.99
RIF1Q5UIP0 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.59□□□□□ -1.99
RIF1Q5UIP0 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC2.59□□□□□ -1.99
RIF1Q5UIP0 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC2.59□□□□□ -1.99
RIF1Q5UIP0 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
RIF1Q5UIP0 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.59□□□□□ -2
RIF1Q5UIP0 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC2.59□□□□□ -2
RIF1Q5UIP0 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.59□□□□□ -2
RIF1Q5UIP0 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
RIF1Q5UIP0 AC002075.2-201ENST00000425207 252 ntBASIC2.59□□□□□ -2
RIF1Q5UIP0 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC2.59□□□□□ -2
RIF1Q5UIP0 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.59□□□□□ -2
RIF1Q5UIP0 AC099560.2-201ENST00000457554 255 ntBASIC2.59□□□□□ -2
RIF1Q5UIP0 AC108471.1-201ENST00000513977 287 ntBASIC2.59□□□□□ -2
RIF1Q5UIP0 MIR2276-201ENST00000516886 89 ntBASIC2.59□□□□□ -2
RIF1Q5UIP0 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.59□□□□□ -2
RIF1Q5UIP0 AP000919.1-202ENST00000581139 1264 ntBASIC2.59□□□□□ -2
RIF1Q5UIP0 AC023043.2-201ENST00000589678 1026 ntBASIC2.59□□□□□ -2
RIF1Q5UIP0 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.59□□□□□ -2
RIF1Q5UIP0 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
RIF1Q5UIP0 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC2.58□□□□□ -2
RIF1Q5UIP0 AC018555.1-201ENST00000567548 1980 ntBASIC2.58□□□□□ -2
RIF1Q5UIP0 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RIF1Q5UIP0 MORF4L1P6-201ENST00000418771 268 ntBASIC2.58□□□□□ -2
RIF1Q5UIP0 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.58□□□□□ -2
RIF1Q5UIP0 SRIP1-201ENST00000489235 288 ntBASIC2.58□□□□□ -2
RIF1Q5UIP0 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.58□□□□□ -2
RIF1Q5UIP0 AC233702.9-201ENST00000581528 203 ntBASIC2.58□□□□□ -2
RIF1Q5UIP0 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.58□□□□□ -2
RIF1Q5UIP0 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.58□□□□□ -2
RIF1Q5UIP0 SNORA80E-201ENST00000384744 137 ntBASIC2.58□□□□□ -2
RIF1Q5UIP0 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.58□□□□□ -2
RIF1Q5UIP0 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC2.58□□□□□ -2
RIF1Q5UIP0 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.58□□□□□ -2
RIF1Q5UIP0 RPL12P18-201ENST00000437175 325 ntBASIC2.58□□□□□ -2
RIF1Q5UIP0 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.58□□□□□ -2
RIF1Q5UIP0 AC004801.2-202ENST00000463559 283 ntBASIC2.58□□□□□ -2
RIF1Q5UIP0 AC055855.1-201ENST00000489563 579 ntBASIC2.58□□□□□ -2
RIF1Q5UIP0 AC025445.1-201ENST00000502728 300 ntBASIC2.58□□□□□ -2
RIF1Q5UIP0 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.58□□□□□ -2
RIF1Q5UIP0 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC2.58□□□□□ -2
RIF1Q5UIP0 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.58□□□□□ -2
RIF1Q5UIP0 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC2.58□□□□□ -2
RIF1Q5UIP0 SNORA35B-201ENST00000607417 129 ntBASIC2.58□□□□□ -2
RIF1Q5UIP0 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
RIF1Q5UIP0 AL592494.2-201ENST00000425455 1548 ntBASIC2.57□□□□□ -2
RIF1Q5UIP0 AC096644.4-201ENST00000563417 2912 ntBASIC2.57□□□□□ -2
RIF1Q5UIP0 SNORD62.1-201ENST00000362541 86 ntBASIC2.57□□□□□ -2
RIF1Q5UIP0 RNU6-76P-201ENST00000384060 104 ntBASIC2.57□□□□□ -2
RIF1Q5UIP0 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
RIF1Q5UIP0 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC2.57□□□□□ -2
RIF1Q5UIP0 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.57□□□□□ -2
RIF1Q5UIP0 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC2.57□□□□□ -2
RIF1Q5UIP0 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.57□□□□□ -2
RIF1Q5UIP0 RNU4ATAC6P-201ENST00000516592 126 ntBASIC2.57□□□□□ -2
RIF1Q5UIP0 RN7SKP82-201ENST00000516786 223 ntBASIC2.57□□□□□ -2
RIF1Q5UIP0 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.57□□□□□ -2
RIF1Q5UIP0 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.57□□□□□ -2
RIF1Q5UIP0 AC091903.1-201ENST00000624322 454 ntBASIC2.57□□□□□ -2
RIF1Q5UIP0 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RIF1Q5UIP0 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC2.57□□□□□ -2
RIF1Q5UIP0 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC2.57□□□□□ -2
RIF1Q5UIP0 U8.13-201ENST00000390842 128 ntBASIC2.57□□□□□ -2
RIF1Q5UIP0 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.57□□□□□ -2
RIF1Q5UIP0 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.57□□□□□ -2
RIF1Q5UIP0 KATNBL1P2-201ENST00000433311 835 ntBASIC2.57□□□□□ -2
RIF1Q5UIP0 AC022795.1-201ENST00000473808 480 ntBASIC2.57□□□□□ -2
RIF1Q5UIP0 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
RIF1Q5UIP0 AC008716.1-201ENST00000511084 513 ntBASIC2.57□□□□□ -2
RIF1Q5UIP0 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC2.57□□□□□ -2
RIF1Q5UIP0 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.57□□□□□ -2
RIF1Q5UIP0 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.57□□□□□ -2
RIF1Q5UIP0 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.57□□□□□ -2
RIF1Q5UIP0 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
RIF1Q5UIP0 GABRG2-229ENST00000641017 3628 ntBASIC2.56□□□□□ -2
RIF1Q5UIP0 KPNA2P2-201ENST00000419546 1489 ntBASIC2.56□□□□□ -2
RIF1Q5UIP0 AP002088.1-201ENST00000382740 395 ntBASIC2.56□□□□□ -2
RIF1Q5UIP0 RNU6-55P-201ENST00000411092 107 ntBASIC2.56□□□□□ -2
RIF1Q5UIP0 RNU6-954P-201ENST00000411355 107 ntBASIC2.56□□□□□ -2
RIF1Q5UIP0 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.56□□□□□ -2
RIF1Q5UIP0 AC112220.1-201ENST00000434628 355 ntBASIC2.56□□□□□ -2
RIF1Q5UIP0 RPL23AP16-201ENST00000441715 421 ntBASIC2.56□□□□□ -2
RIF1Q5UIP0 HMGB3P6-201ENST00000444896 598 ntBASIC2.56□□□□□ -2
RIF1Q5UIP0 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.56□□□□□ -2
RIF1Q5UIP0 RANP3-201ENST00000530970 276 ntBASIC2.56□□□□□ -2
RIF1Q5UIP0 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms