Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 AC131280.1-202ENST00000624067 4211 ntBASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 Y_RNA.466-201ENST00000384294 113 ntBASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 EIF2S2P4-201ENST00000461070 984 ntBASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 RN7SL75P-201ENST00000461926 281 ntBASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 RPL9P32-201ENST00000464118 620 ntBASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 RPL21P71-201ENST00000465598 459 ntBASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 RNU4ATAC3P-201ENST00000516699 126 ntBASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 AC098826.3-201ENST00000603823 466 ntBASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 SKINT1L-201ENST00000401057 817 ntBASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 AL512430.2-201ENST00000406786 339 ntBASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 RNU4-53P-201ENST00000410828 140 ntBASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 TRGV5P-201ENST00000419915 354 ntBASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 PDCL2P2-201ENST00000533651 189 ntBASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 AC009101.1-201ENST00000568135 242 ntBASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 MIR3186-201ENST00000577404 85 ntBASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 MIR5047-201ENST00000579212 100 ntBASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC1.79□□□□□ -2.12
VPS13DQ5THJ4 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
VPS13DQ5THJ4 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
VPS13DQ5THJ4 AL159169.1-201ENST00000421119 127 ntBASIC1.78□□□□□ -2.12
VPS13DQ5THJ4 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC1.78□□□□□ -2.12
VPS13DQ5THJ4 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC1.78□□□□□ -2.12
VPS13DQ5THJ4 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC1.78□□□□□ -2.12
VPS13DQ5THJ4 AC109315.1-201ENST00000584143 1347 ntBASIC1.78□□□□□ -2.12
VPS13DQ5THJ4 AC078899.3-201ENST00000599065 212 ntBASIC1.78□□□□□ -2.12
VPS13DQ5THJ4 AC022031.1-201ENST00000585985 2593 ntBASIC1.78□□□□□ -2.12
VPS13DQ5THJ4 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC1.78□□□□□ -2.12
VPS13DQ5THJ4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.78□□□□□ -2.12
VPS13DQ5THJ4 AC099063.2-201ENST00000446360 662 ntBASIC1.78□□□□□ -2.12
VPS13DQ5THJ4 AP000926.3-201ENST00000497201 299 ntBASIC1.78□□□□□ -2.12
VPS13DQ5THJ4 OR5H3P-201ENST00000502817 919 ntBASIC1.78□□□□□ -2.12
VPS13DQ5THJ4 RPL7P20-201ENST00000520308 745 ntBASIC1.78□□□□□ -2.12
VPS13DQ5THJ4 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC1.78□□□□□ -2.12
VPS13DQ5THJ4 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC1.78□□□□□ -2.12
VPS13DQ5THJ4 MIR4644-201ENST00000579929 84 ntBASIC1.78□□□□□ -2.12
VPS13DQ5THJ4 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
VPS13DQ5THJ4 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
VPS13DQ5THJ4 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
VPS13DQ5THJ4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
VPS13DQ5THJ4 RN7SKP58-201ENST00000411010 305 ntBASIC1.78□□□□□ -2.12
VPS13DQ5THJ4 RPS20P22-201ENST00000473700 357 ntBASIC1.78□□□□□ -2.12
VPS13DQ5THJ4 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.78□□□□□ -2.12
VPS13DQ5THJ4 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC1.78□□□□□ -2.12
VPS13DQ5THJ4 AC074140.1-201ENST00000621617 208 ntBASIC1.78□□□□□ -2.12
VPS13DQ5THJ4 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC1.78□□□□□ -2.12
VPS13DQ5THJ4 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC1.78□□□□□ -2.13
VPS13DQ5THJ4 AC006020.1-201ENST00000420179 1854 ntBASIC1.78□□□□□ -2.13
VPS13DQ5THJ4 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.13
VPS13DQ5THJ4 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.13
VPS13DQ5THJ4 IPMKP1-201ENST00000425988 855 ntBASIC1.77□□□□□ -2.13
VPS13DQ5THJ4 OR2B8P-201ENST00000432841 938 ntBASIC1.77□□□□□ -2.13
VPS13DQ5THJ4 snoU13.23-201ENST00000458863 104 ntBASIC1.77□□□□□ -2.13
VPS13DQ5THJ4 AP001317.1-201ENST00000531194 960 ntBASIC1.77□□□□□ -2.13
VPS13DQ5THJ4 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC1.77□□□□□ -2.13
VPS13DQ5THJ4 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC1.77□□□□□ -2.13
VPS13DQ5THJ4 AC103710.3-201ENST00000608157 948 ntBASIC1.77□□□□□ -2.13
VPS13DQ5THJ4 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC1.77□□□□□ -2.13
VPS13DQ5THJ4 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.77□□□□□ -2.13
VPS13DQ5THJ4 OR5H5P-201ENST00000503164 928 ntBASIC1.77□□□□□ -2.13
VPS13DQ5THJ4 RNA5SP380-201ENST00000517190 98 ntBASIC1.77□□□□□ -2.13
VPS13DQ5THJ4 AL354950.1-201ENST00000614150 568 ntBASIC1.77□□□□□ -2.13
VPS13DQ5THJ4 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
VPS13DQ5THJ4 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC1.77□□□□□ -2.13
VPS13DQ5THJ4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC1.77□□□□□ -2.13
VPS13DQ5THJ4 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.77□□□□□ -2.13
VPS13DQ5THJ4 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.77□□□□□ -2.13
VPS13DQ5THJ4 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC1.77□□□□□ -2.13
VPS13DQ5THJ4 AC011037.1-201ENST00000483964 558 ntBASIC1.77□□□□□ -2.13
VPS13DQ5THJ4 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.77□□□□□ -2.13
VPS13DQ5THJ4 ENSA-210ENST00000503241 574 ntTSL 3 BASIC1.77□□□□□ -2.13
VPS13DQ5THJ4 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC1.77□□□□□ -2.13
VPS13DQ5THJ4 AC087468.1-201ENST00000604365 630 ntBASIC1.77□□□□□ -2.13
VPS13DQ5THJ4 AL365503.1-201ENST00000605247 905 ntBASIC1.77□□□□□ -2.13
VPS13DQ5THJ4 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC1.77□□□□□ -2.13
VPS13DQ5THJ4 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC1.77□□□□□ -2.13
VPS13DQ5THJ4 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
VPS13DQ5THJ4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
VPS13DQ5THJ4 RNA5SP213-201ENST00000391031 106 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms