Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
VARS2Q5ST30 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7□□□□□ -1.29
VARS2Q5ST30 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7□□□□□ -1.29
VARS2Q5ST30 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VARS2Q5ST30 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VARS2Q5ST30 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VARS2Q5ST30 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.99□□□□□ -1.29
VARS2Q5ST30 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VARS2Q5ST30 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.99□□□□□ -1.29
VARS2Q5ST30 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
VARS2Q5ST30 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VARS2Q5ST30 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.99□□□□□ -1.29
VARS2Q5ST30 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VARS2Q5ST30 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
VARS2Q5ST30 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
VARS2Q5ST30 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.99□□□□□ -1.29
VARS2Q5ST30 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
VARS2Q5ST30 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
VARS2Q5ST30 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VARS2Q5ST30 RPS4XP7-201ENST00000406274 780 ntBASIC6.99□□□□□ -1.29
VARS2Q5ST30 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.99□□□□□ -1.29
VARS2Q5ST30 PIGFP3-201ENST00000441918 722 ntBASIC6.99□□□□□ -1.29
VARS2Q5ST30 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC6.99□□□□□ -1.29
VARS2Q5ST30 RNU7-27P-201ENST00000459281 62 ntBASIC6.99□□□□□ -1.29
VARS2Q5ST30 AC108043.1-201ENST00000512696 574 ntBASIC6.99□□□□□ -1.29
VARS2Q5ST30 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.99□□□□□ -1.29
VARS2Q5ST30 AC091144.1-201ENST00000519573 138 ntBASIC6.99□□□□□ -1.29
VARS2Q5ST30 AL133399.1-201ENST00000527476 298 ntBASIC6.99□□□□□ -1.29
VARS2Q5ST30 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC6.99□□□□□ -1.29
VARS2Q5ST30 AL133153.1-201ENST00000557756 303 ntBASIC6.99□□□□□ -1.29
VARS2Q5ST30 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.99□□□□□ -1.29
VARS2Q5ST30 AC002310.3-201ENST00000569728 723 ntBASIC6.99□□□□□ -1.29
VARS2Q5ST30 RPL23AP84-201ENST00000571193 464 ntBASIC6.99□□□□□ -1.29
VARS2Q5ST30 AC090615.1-201ENST00000577519 154 ntBASIC6.99□□□□□ -1.29
VARS2Q5ST30 RN7SL208P-201ENST00000577964 296 ntBASIC6.99□□□□□ -1.29
VARS2Q5ST30 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.99□□□□□ -1.29
VARS2Q5ST30 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC6.99□□□□□ -1.29
VARS2Q5ST30 AL049794.2-201ENST00000616301 365 ntBASIC6.99□□□□□ -1.29
VARS2Q5ST30 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VARS2Q5ST30 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VARS2Q5ST30 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VARS2Q5ST30 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
VARS2Q5ST30 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
VARS2Q5ST30 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
VARS2Q5ST30 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.99□□□□□ -1.29
VARS2Q5ST30 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.99□□□□□ -1.29
VARS2Q5ST30 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VARS2Q5ST30 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.99□□□□□ -1.29
VARS2Q5ST30 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VARS2Q5ST30 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VARS2Q5ST30 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
VARS2Q5ST30 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VARS2Q5ST30 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
VARS2Q5ST30 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
VARS2Q5ST30 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
VARS2Q5ST30 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
VARS2Q5ST30 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
VARS2Q5ST30 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
VARS2Q5ST30 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.98□□□□□ -1.29
VARS2Q5ST30 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.98□□□□□ -1.29
VARS2Q5ST30 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
VARS2Q5ST30 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VARS2Q5ST30 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
VARS2Q5ST30 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VARS2Q5ST30 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC6.98□□□□□ -1.29
VARS2Q5ST30 U3.13-201ENST00000364804 214 ntBASIC6.98□□□□□ -1.29
VARS2Q5ST30 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.98□□□□□ -1.29
VARS2Q5ST30 Y_RNA.563-201ENST00000384707 108 ntBASIC6.98□□□□□ -1.29
VARS2Q5ST30 AL079342.1-201ENST00000401460 267 ntBASIC6.98□□□□□ -1.29
VARS2Q5ST30 AL034374.1-201ENST00000406329 351 ntBASIC6.98□□□□□ -1.29
VARS2Q5ST30 AL030996.1-201ENST00000411430 235 ntBASIC6.98□□□□□ -1.29
VARS2Q5ST30 RPS21P8-201ENST00000413365 247 ntBASIC6.98□□□□□ -1.29
VARS2Q5ST30 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.98□□□□□ -1.29
VARS2Q5ST30 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC6.98□□□□□ -1.29
VARS2Q5ST30 AC093106.2-201ENST00000428212 385 ntBASIC6.98□□□□□ -1.29
VARS2Q5ST30 RPL12P16-201ENST00000431098 498 ntBASIC6.98□□□□□ -1.29
VARS2Q5ST30 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.98□□□□□ -1.29
VARS2Q5ST30 AL445433.1-201ENST00000457507 257 ntBASIC6.98□□□□□ -1.29
VARS2Q5ST30 SNORD97-201ENST00000459187 142 ntBASIC6.98□□□□□ -1.29
VARS2Q5ST30 RN7SL834P-201ENST00000461450 286 ntBASIC6.98□□□□□ -1.29
VARS2Q5ST30 RN7SL552P-201ENST00000462094 276 ntBASIC6.98□□□□□ -1.29
VARS2Q5ST30 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC6.98□□□□□ -1.29
VARS2Q5ST30 RN7SL705P-201ENST00000481678 294 ntBASIC6.98□□□□□ -1.29
VARS2Q5ST30 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.98□□□□□ -1.29
VARS2Q5ST30 RN7SL362P-201ENST00000494228 267 ntBASIC6.98□□□□□ -1.29
VARS2Q5ST30 SNX18P24-201ENST00000505249 671 ntBASIC6.98□□□□□ -1.29
VARS2Q5ST30 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC6.98□□□□□ -1.29
VARS2Q5ST30 RNU6-168P-201ENST00000516189 101 ntBASIC6.98□□□□□ -1.29
VARS2Q5ST30 Y_RNA.709-201ENST00000516952 92 ntBASIC6.98□□□□□ -1.29
VARS2Q5ST30 CYCSP22-201ENST00000517555 339 ntBASIC6.98□□□□□ -1.29
VARS2Q5ST30 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.98□□□□□ -1.29
VARS2Q5ST30 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VARS2Q5ST30 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VARS2Q5ST30 AC005951.2-201ENST00000576282 495 ntBASIC6.98□□□□□ -1.29
VARS2Q5ST30 AL160281.1-201ENST00000605307 311 ntBASIC6.98□□□□□ -1.29
VARS2Q5ST30 uc_338.31-201ENST00000615595 186 ntBASIC6.98□□□□□ -1.29
VARS2Q5ST30 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC6.98□□□□□ -1.29
VARS2Q5ST30 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC6.98□□□□□ -1.29
VARS2Q5ST30 CDRT1-208ENST00000630868 794 ntBASIC6.98□□□□□ -1.29
VARS2Q5ST30 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms