Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 RPL18P10-201ENST00000425606 538 ntBASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 AL356583.2-201ENST00000426536 280 ntBASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 NANOGP6-201ENST00000429190 847 ntBASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 HMGB3P9-201ENST00000441799 583 ntBASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 FAM103A2P-201ENST00000444122 354 ntBASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 AL590365.1-201ENST00000450788 243 ntBASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 AL691482.1-201ENST00000453255 87 ntBASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 BTF3P5-201ENST00000457252 467 ntBASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 AC108751.2-201ENST00000469993 231 ntBASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 ST13P14-201ENST00000474095 734 ntBASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 RPL7P24-201ENST00000493052 752 ntBASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 LAMTOR3P2-201ENST00000504479 232 ntBASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 AC006390.1-201ENST00000508068 283 ntBASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 AC109464.2-201ENST00000510242 943 ntBASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 RNU6-27P-201ENST00000516146 107 ntBASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 RNU6-714P-201ENST00000516963 103 ntBASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 NDUFB4P11-201ENST00000560510 395 ntBASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 MIR4284-201ENST00000578924 81 ntBASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 RN7SL690P-201ENST00000582087 240 ntBASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 AC112191.3-201ENST00000604371 277 ntBASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 AL353600.1-201ENST00000608148 251 ntBASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 CR381572.2-201ENST00000624852 397 ntBASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 AL356489.2-201ENST00000566968 3528 ntBASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 CCT4P2-201ENST00000233836 1548 ntBASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 RNU6-837P-201ENST00000391056 108 ntBASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 DEFB108C-201ENST00000400154 252 ntBASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 AL592291.1-201ENST00000403830 352 ntBASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 RSU1P3-201ENST00000412878 835 ntBASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 USP9YP13-201ENST00000417797 480 ntBASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 AIMP1P1-201ENST00000418670 937 ntBASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 E2F6P2-201ENST00000420708 748 ntBASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 MTCYBP45-201ENST00000435243 565 ntBASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 RPL22P17-201ENST00000438729 315 ntBASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 AC108734.1-201ENST00000439549 399 ntBASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 AL450023.3-201ENST00000440592 271 ntBASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 AP1S2P1-201ENST00000457344 379 ntBASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 MTCO1P42-201ENST00000457379 726 ntBASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 AC020890.1-201ENST00000491837 504 ntBASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 RN7SL441P-201ENST00000492388 296 ntBASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 AP002748.2-201ENST00000528671 348 ntBASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 SEPT7P9-203ENST00000604116 343 ntBASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 AC004853.1-201ENST00000604902 698 ntBASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 AC007497.1-201ENST00000610421 561 ntBASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 AC138932.5-201ENST00000617759 563 ntBASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 AC019206.1-201ENST00000621938 425 ntBASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 AC040168.1-201ENST00000623594 991 ntBASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 AL603839.4-201ENST00000624658 1005 ntBASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 AP001273.1-201ENST00000624493 3152 ntBASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 AC090337.1-201ENST00000579651 2074 ntBASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CCDC144BQ3MJ40 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC144BQ3MJ40 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC144BQ3MJ40 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CCDC144BQ3MJ40 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CCDC144BQ3MJ40 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC144BQ3MJ40 FRG1BP-201ENST00000278882 761 ntBASIC5.54□□□□□ -1.52
CCDC144BQ3MJ40 RNU6-1207P-201ENST00000384343 107 ntBASIC5.54□□□□□ -1.52
CCDC144BQ3MJ40 SNORD115.1-201ENST00000391109 76 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms