Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 MIR432-201ENST00000606207 94 ntBASIC4.26□□□□□ -1.73
USP41Q3LFD5 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.26□□□□□ -1.73
USP41Q3LFD5 AC064801.1-201ENST00000612025 407 ntBASIC4.26□□□□□ -1.73
USP41Q3LFD5 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
USP41Q3LFD5 AP003485.2-201ENST00000623636 610 ntBASIC4.26□□□□□ -1.73
USP41Q3LFD5 AC026634.1-201ENST00000634369 198 ntBASIC4.26□□□□□ -1.73
USP41Q3LFD5 AC012442.3-202ENST00000636742 206 ntBASIC4.26□□□□□ -1.73
USP41Q3LFD5 AC104454.1-201ENST00000421341 1401 ntBASIC4.26□□□□□ -1.73
USP41Q3LFD5 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.26□□□□□ -1.73
USP41Q3LFD5 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.26□□□□□ -1.73
USP41Q3LFD5 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
USP41Q3LFD5 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
USP41Q3LFD5 MTND5P31-201ENST00000419366 1374 ntBASIC4.26□□□□□ -1.73
USP41Q3LFD5 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
USP41Q3LFD5 AP000776.1-201ENST00000530032 1663 ntBASIC4.26□□□□□ -1.73
USP41Q3LFD5 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
USP41Q3LFD5 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
USP41Q3LFD5 AC027287.1-201ENST00000553115 1453 ntBASIC4.25□□□□□ -1.73
USP41Q3LFD5 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
USP41Q3LFD5 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
USP41Q3LFD5 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
USP41Q3LFD5 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.25□□□□□ -1.73
USP41Q3LFD5 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
USP41Q3LFD5 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
USP41Q3LFD5 SNORD113-6-201ENST00000363345 75 ntBASIC4.25□□□□□ -1.73
USP41Q3LFD5 RNA5SP97-201ENST00000365006 84 ntBASIC4.25□□□□□ -1.73
USP41Q3LFD5 RNU6-157P-201ENST00000383957 107 ntBASIC4.25□□□□□ -1.73
USP41Q3LFD5 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.25□□□□□ -1.73
USP41Q3LFD5 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
USP41Q3LFD5 RN7SKP156-201ENST00000410308 342 ntBASIC4.25□□□□□ -1.73
USP41Q3LFD5 RNU6-757P-201ENST00000410334 100 ntBASIC4.25□□□□□ -1.73
USP41Q3LFD5 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.25□□□□□ -1.73
USP41Q3LFD5 LUZP4P1-201ENST00000415420 344 ntBASIC4.25□□□□□ -1.73
USP41Q3LFD5 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
USP41Q3LFD5 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.25□□□□□ -1.73
USP41Q3LFD5 MTND1P32-201ENST00000433043 938 ntBASIC4.25□□□□□ -1.73
USP41Q3LFD5 GOT2P5-201ENST00000433995 546 ntBASIC4.25□□□□□ -1.73
USP41Q3LFD5 AC241584.1-201ENST00000438469 1241 ntBASIC4.25□□□□□ -1.73
USP41Q3LFD5 NOTCH2P1-201ENST00000443481 624 ntBASIC4.25□□□□□ -1.73
USP41Q3LFD5 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.25□□□□□ -1.73
USP41Q3LFD5 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.25□□□□□ -1.73
USP41Q3LFD5 RN7SL271P-201ENST00000487601 295 ntBASIC4.25□□□□□ -1.73
USP41Q3LFD5 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.25□□□□□ -1.73
USP41Q3LFD5 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.25□□□□□ -1.73
USP41Q3LFD5 AC021146.8-201ENST00000507455 733 ntBASIC4.25□□□□□ -1.73
USP41Q3LFD5 AC079395.1-201ENST00000510981 262 ntBASIC4.25□□□□□ -1.73
USP41Q3LFD5 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.25□□□□□ -1.73
USP41Q3LFD5 MTCO1P30-201ENST00000515244 580 ntBASIC4.25□□□□□ -1.73
USP41Q3LFD5 TRMT10BP1-201ENST00000519377 943 ntBASIC4.25□□□□□ -1.73
USP41Q3LFD5 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.25□□□□□ -1.73
USP41Q3LFD5 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.25□□□□□ -1.73
USP41Q3LFD5 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.25□□□□□ -1.73
USP41Q3LFD5 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.25□□□□□ -1.73
USP41Q3LFD5 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.25□□□□□ -1.73
USP41Q3LFD5 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.25□□□□□ -1.73
USP41Q3LFD5 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.25□□□□□ -1.73
USP41Q3LFD5 DUXAP1-201ENST00000556632 463 ntBASIC4.25□□□□□ -1.73
USP41Q3LFD5 TRAV15-201ENST00000556680 249 ntBASIC4.25□□□□□ -1.73
USP41Q3LFD5 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.25□□□□□ -1.73
USP41Q3LFD5 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.25□□□□□ -1.73
USP41Q3LFD5 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.25□□□□□ -1.73
USP41Q3LFD5 SNORD39.3-201ENST00000584451 71 ntBASIC4.25□□□□□ -1.73
USP41Q3LFD5 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.25□□□□□ -1.73
USP41Q3LFD5 AC015726.1-201ENST00000602353 681 ntBASIC4.25□□□□□ -1.73
USP41Q3LFD5 AC008739.3-201ENST00000603262 127 ntBASIC4.25□□□□□ -1.73
USP41Q3LFD5 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.25□□□□□ -1.73
USP41Q3LFD5 AC078899.5-201ENST00000612475 178 ntBASIC4.25□□□□□ -1.73
USP41Q3LFD5 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
USP41Q3LFD5 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.25□□□□□ -1.73
USP41Q3LFD5 FP236240.3-201ENST00000623061 327 ntBASIC4.25□□□□□ -1.73
USP41Q3LFD5 AC007490.1-201ENST00000624321 703 ntBASIC4.25□□□□□ -1.73
USP41Q3LFD5 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
USP41Q3LFD5 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.25□□□□□ -1.73
USP41Q3LFD5 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.25□□□□□ -1.73
USP41Q3LFD5 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.24□□□□□ -1.73
USP41Q3LFD5 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
USP41Q3LFD5 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
USP41Q3LFD5 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
USP41Q3LFD5 OR4A15-201ENST00000314706 1035 ntBASIC4.24□□□□□ -1.73
USP41Q3LFD5 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
USP41Q3LFD5 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
USP41Q3LFD5 RNU6-441P-201ENST00000384545 106 ntBASIC4.24□□□□□ -1.73
USP41Q3LFD5 SNORA3.3-201ENST00000408712 125 ntBASIC4.24□□□□□ -1.73
USP41Q3LFD5 MTND4P22-201ENST00000413116 1169 ntBASIC4.24□□□□□ -1.73
USP41Q3LFD5 NUP35P2-201ENST00000416748 943 ntBASIC4.24□□□□□ -1.73
USP41Q3LFD5 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.24□□□□□ -1.73
USP41Q3LFD5 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.24□□□□□ -1.73
USP41Q3LFD5 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.24□□□□□ -1.73
USP41Q3LFD5 MTND5P25-201ENST00000430499 799 ntBASIC4.24□□□□□ -1.73
USP41Q3LFD5 AL050321.1-201ENST00000432363 400 ntBASIC4.24□□□□□ -1.73
USP41Q3LFD5 B3GNT2P1-201ENST00000434960 952 ntBASIC4.24□□□□□ -1.73
USP41Q3LFD5 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.24□□□□□ -1.73
USP41Q3LFD5 AL008629.1-201ENST00000438615 184 ntBASIC4.24□□□□□ -1.73
USP41Q3LFD5 AC104978.1-201ENST00000449387 391 ntBASIC4.24□□□□□ -1.73
USP41Q3LFD5 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.24□□□□□ -1.73
USP41Q3LFD5 FABP3P2-201ENST00000453169 399 ntBASIC4.24□□□□□ -1.73
USP41Q3LFD5 RPS20P21-201ENST00000466859 343 ntBASIC4.24□□□□□ -1.73
USP41Q3LFD5 AC087879.1-201ENST00000474343 374 ntBASIC4.24□□□□□ -1.73
USP41Q3LFD5 AC013828.1-201ENST00000481845 158 ntBASIC4.24□□□□□ -1.73
USP41Q3LFD5 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms