Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC008173.1-201ENST00000418901 264 ntBASIC4□□□□□ -1.77
SHROOM1Q2M3G4 AL606495.1-201ENST00000422100 813 ntBASIC4□□□□□ -1.77
SHROOM1Q2M3G4 HSFY1P1-201ENST00000423928 1178 ntBASIC4□□□□□ -1.77
SHROOM1Q2M3G4 AL512649.1-201ENST00000428997 581 ntBASIC4□□□□□ -1.77
SHROOM1Q2M3G4 IFNNP1-201ENST00000429219 553 ntBASIC4□□□□□ -1.77
SHROOM1Q2M3G4 UBE2V1P1-201ENST00000430836 445 ntBASIC4□□□□□ -1.77
SHROOM1Q2M3G4 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC4□□□□□ -1.77
SHROOM1Q2M3G4 AL671855.1-201ENST00000446875 1203 ntBASIC4□□□□□ -1.77
SHROOM1Q2M3G4 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4□□□□□ -1.77
SHROOM1Q2M3G4 HMGB1P16-201ENST00000447155 540 ntBASIC4□□□□□ -1.77
SHROOM1Q2M3G4 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4□□□□□ -1.77
SHROOM1Q2M3G4 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4□□□□□ -1.77
SHROOM1Q2M3G4 RN7SL330P-201ENST00000469709 307 ntBASIC4□□□□□ -1.77
SHROOM1Q2M3G4 RN7SL807P-201ENST00000470923 297 ntBASIC4□□□□□ -1.77
SHROOM1Q2M3G4 AC104689.1-201ENST00000473356 768 ntBASIC4□□□□□ -1.77
SHROOM1Q2M3G4 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4□□□□□ -1.77
SHROOM1Q2M3G4 RPL32P34-201ENST00000486380 400 ntBASIC4□□□□□ -1.77
SHROOM1Q2M3G4 NAMPTP2-201ENST00000505629 1115 ntBASIC4□□□□□ -1.77
SHROOM1Q2M3G4 TMEM248P1-201ENST00000510579 951 ntBASIC4□□□□□ -1.77
SHROOM1Q2M3G4 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4□□□□□ -1.77
SHROOM1Q2M3G4 AC026333.2-201ENST00000542164 106 ntBASIC4□□□□□ -1.77
SHROOM1Q2M3G4 AP003717.3-201ENST00000544832 1180 ntBASIC4□□□□□ -1.77
SHROOM1Q2M3G4 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4□□□□□ -1.77
SHROOM1Q2M3G4 GTF2IP8-201ENST00000560687 584 ntBASIC4□□□□□ -1.77
SHROOM1Q2M3G4 AC106734.1-201ENST00000568646 663 ntBASIC4□□□□□ -1.77
SHROOM1Q2M3G4 AC090079.2-201ENST00000575289 768 ntBASIC4□□□□□ -1.77
SHROOM1Q2M3G4 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4□□□□□ -1.77
SHROOM1Q2M3G4 NTAN1P1-201ENST00000603150 646 ntBASIC4□□□□□ -1.77
SHROOM1Q2M3G4 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4□□□□□ -1.77
SHROOM1Q2M3G4 AL359535.1-201ENST00000612100 1087 ntBASIC4□□□□□ -1.77
SHROOM1Q2M3G4 VN1R9P-201ENST00000614184 867 ntBASIC4□□□□□ -1.77
SHROOM1Q2M3G4 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
SHROOM1Q2M3G4 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4□□□□□ -1.77
SHROOM1Q2M3G4 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4□□□□□ -1.77
SHROOM1Q2M3G4 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4□□□□□ -1.77
SHROOM1Q2M3G4 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
SHROOM1Q2M3G4 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SHROOM1Q2M3G4 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 MFSD8-213ENST00000641134 1327 ntBASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 SNORA63.3-201ENST00000362682 132 ntBASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 UBE2V1P11-201ENST00000411559 285 ntBASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 HMGB1P45-201ENST00000435986 653 ntBASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 NPM1P49-201ENST00000448027 714 ntBASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 RPL6P9-201ENST00000466502 859 ntBASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 AC017015.1-201ENST00000477387 286 ntBASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 AC015908.1-201ENST00000478739 476 ntBASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 RPS4XP13-201ENST00000483219 789 ntBASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 AC092902.1-201ENST00000486999 259 ntBASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 AL035404.1-201ENST00000497982 568 ntBASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 AC121161.1-201ENST00000510606 652 ntBASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 RPL7L1P13-201ENST00000511702 739 ntBASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 AC005798.1-201ENST00000513715 387 ntBASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 MIR5680-201ENST00000577577 84 ntBASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 AC113194.1-201ENST00000606037 500 ntBASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 AC011816.2-201ENST00000607089 556 ntBASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 AC106730.3-201ENST00000624568 641 ntBASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 AC132825.7-201ENST00000638744 335 ntBASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 AC138915.3-201ENST00000562908 1389 ntBASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
SHROOM1Q2M3G4 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 SNORD56.4-201ENST00000363883 71 ntBASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 SNORA38.1-201ENST00000364172 131 ntBASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 SNORA51.12-201ENST00000384448 134 ntBASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 AL122016.1-201ENST00000403365 367 ntBASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 BTBD10P2-201ENST00000404779 676 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms