Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 AC012020.1-201ENST00000624541 1728 ntBASIC4.28□□□□□ -1.72
PTCH1Q13635 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.28□□□□□ -1.72
PTCH1Q13635 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.28□□□□□ -1.72
PTCH1Q13635 GLRXP1-201ENST00000423261 334 ntBASIC4.28□□□□□ -1.72
PTCH1Q13635 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTCH1Q13635 AC108734.1-201ENST00000439549 399 ntBASIC4.28□□□□□ -1.72
PTCH1Q13635 MED6P1-201ENST00000439659 713 ntBASIC4.28□□□□□ -1.72
PTCH1Q13635 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.28□□□□□ -1.72
PTCH1Q13635 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.28□□□□□ -1.72
PTCH1Q13635 AC010401.1-201ENST00000463867 348 ntBASIC4.28□□□□□ -1.72
PTCH1Q13635 AC107398.1-201ENST00000486904 505 ntBASIC4.28□□□□□ -1.72
PTCH1Q13635 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.28□□□□□ -1.72
PTCH1Q13635 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.28□□□□□ -1.72
PTCH1Q13635 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.28□□□□□ -1.72
PTCH1Q13635 AP004607.9-201ENST00000618202 316 ntBASIC4.28□□□□□ -1.72
PTCH1Q13635 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTCH1Q13635 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
PTCH1Q13635 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTCH1Q13635 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTCH1Q13635 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTCH1Q13635 MTND4P10-201ENST00000446199 1363 ntBASIC4.27□□□□□ -1.73
PTCH1Q13635 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
PTCH1Q13635 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.27□□□□□ -1.73
PTCH1Q13635 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.27□□□□□ -1.73
PTCH1Q13635 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.27□□□□□ -1.73
PTCH1Q13635 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.27□□□□□ -1.73
PTCH1Q13635 AMD1P2-201ENST00000412936 992 ntBASIC4.27□□□□□ -1.73
PTCH1Q13635 RANP4-201ENST00000413361 655 ntBASIC4.27□□□□□ -1.73
PTCH1Q13635 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.27□□□□□ -1.73
PTCH1Q13635 BX679664.1-201ENST00000434429 253 ntBASIC4.27□□□□□ -1.73
PTCH1Q13635 MTND2P21-201ENST00000436242 1042 ntBASIC4.27□□□□□ -1.73
PTCH1Q13635 RPL12P26-201ENST00000452430 487 ntBASIC4.27□□□□□ -1.73
PTCH1Q13635 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.27□□□□□ -1.73
PTCH1Q13635 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.27□□□□□ -1.73
PTCH1Q13635 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.27□□□□□ -1.73
PTCH1Q13635 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.27□□□□□ -1.73
PTCH1Q13635 MIR4769-201ENST00000584126 77 ntBASIC4.27□□□□□ -1.73
PTCH1Q13635 AC016911.1-201ENST00000613297 452 ntBASIC4.27□□□□□ -1.73
PTCH1Q13635 LINC00901.1-201ENST00000617252 152 ntBASIC4.27□□□□□ -1.73
PTCH1Q13635 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.27□□□□□ -1.73
PTCH1Q13635 AP003072.4-201ENST00000624580 310 ntBASIC4.27□□□□□ -1.73
PTCH1Q13635 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTCH1Q13635 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PTCH1Q13635 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
PTCH1Q13635 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.26□□□□□ -1.73
PTCH1Q13635 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PTCH1Q13635 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PTCH1Q13635 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PTCH1Q13635 RNF6P1-201ENST00000444889 1784 ntBASIC4.26□□□□□ -1.73
PTCH1Q13635 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
PTCH1Q13635 AL031679.1-201ENST00000400616 525 ntBASIC4.26□□□□□ -1.73
PTCH1Q13635 AL590290.1-201ENST00000405336 380 ntBASIC4.26□□□□□ -1.73
PTCH1Q13635 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PTCH1Q13635 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.26□□□□□ -1.73
PTCH1Q13635 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.26□□□□□ -1.73
PTCH1Q13635 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.26□□□□□ -1.73
PTCH1Q13635 MTND2P8-201ENST00000450555 1025 ntBASIC4.26□□□□□ -1.73
PTCH1Q13635 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.26□□□□□ -1.73
PTCH1Q13635 RPS4XP22-201ENST00000480755 780 ntBASIC4.26□□□□□ -1.73
PTCH1Q13635 RN7SKP60-201ENST00000516985 239 ntBASIC4.26□□□□□ -1.73
PTCH1Q13635 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.26□□□□□ -1.73
PTCH1Q13635 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.26□□□□□ -1.73
PTCH1Q13635 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PTCH1Q13635 AL512310.1-201ENST00000548639 172 ntBASIC4.26□□□□□ -1.73
PTCH1Q13635 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.26□□□□□ -1.73
PTCH1Q13635 AC067805.1-201ENST00000559344 470 ntBASIC4.26□□□□□ -1.73
PTCH1Q13635 HMGB1P6-201ENST00000569046 646 ntBASIC4.26□□□□□ -1.73
PTCH1Q13635 MIR4458-201ENST00000578872 75 ntBASIC4.26□□□□□ -1.73
PTCH1Q13635 VN1R90P-201ENST00000595717 726 ntBASIC4.26□□□□□ -1.73
PTCH1Q13635 U7.8-201ENST00000619968 63 ntBASIC4.26□□□□□ -1.73
PTCH1Q13635 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.26□□□□□ -1.73
PTCH1Q13635 MIR6715B-201ENST00000637172 77 ntBASIC4.26□□□□□ -1.73
PTCH1Q13635 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
PTCH1Q13635 AL353743.4-201ENST00000422653 1547 ntBASIC4.26□□□□□ -1.73
PTCH1Q13635 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
PTCH1Q13635 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.25□□□□□ -1.73
PTCH1Q13635 RPL30P3-201ENST00000424262 333 ntBASIC4.25□□□□□ -1.73
PTCH1Q13635 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.25□□□□□ -1.73
PTCH1Q13635 AC073508.1-201ENST00000428866 656 ntBASIC4.25□□□□□ -1.73
PTCH1Q13635 AC011242.1-201ENST00000433596 1158 ntBASIC4.25□□□□□ -1.73
PTCH1Q13635 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.25□□□□□ -1.73
PTCH1Q13635 FDX1P2-201ENST00000450769 375 ntBASIC4.25□□□□□ -1.73
PTCH1Q13635 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.25□□□□□ -1.73
PTCH1Q13635 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.25□□□□□ -1.73
PTCH1Q13635 AC004801.2-202ENST00000463559 283 ntBASIC4.25□□□□□ -1.73
PTCH1Q13635 PRDX3P4-201ENST00000470828 747 ntBASIC4.25□□□□□ -1.73
PTCH1Q13635 AC126389.1-201ENST00000477436 290 ntBASIC4.25□□□□□ -1.73
PTCH1Q13635 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.25□□□□□ -1.73
PTCH1Q13635 SETP12-201ENST00000514068 805 ntBASIC4.25□□□□□ -1.73
PTCH1Q13635 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC4.25□□□□□ -1.73
PTCH1Q13635 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PTCH1Q13635 AC025946.2-201ENST00000603398 234 ntBASIC4.25□□□□□ -1.73
PTCH1Q13635 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.25□□□□□ -1.73
PTCH1Q13635 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PTCH1Q13635 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PTCH1Q13635 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
PTCH1Q13635 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.24□□□□□ -1.73
PTCH1Q13635 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PTCH1Q13635 SNORA18.3-201ENST00000384122 132 ntBASIC4.24□□□□□ -1.73
PTCH1Q13635 NPM1P11-201ENST00000417106 855 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms