Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 AL161722.2-201ENST00000434731 981 ntBASIC5.42□□□□□ -1.54
ERVFC1P60507 AL136380.1-201ENST00000447970 162 ntBASIC5.42□□□□□ -1.54
ERVFC1P60507 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.42□□□□□ -1.54
ERVFC1P60507 BX842559.2-201ENST00000451418 605 ntBASIC5.42□□□□□ -1.54
ERVFC1P60507 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC5.42□□□□□ -1.54
ERVFC1P60507 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC5.42□□□□□ -1.54
ERVFC1P60507 Y_RNA.639-201ENST00000458981 102 ntBASIC5.42□□□□□ -1.54
ERVFC1P60507 RPL21P71-201ENST00000465598 459 ntBASIC5.42□□□□□ -1.54
ERVFC1P60507 RN7SL385P-201ENST00000468873 276 ntBASIC5.42□□□□□ -1.54
ERVFC1P60507 AC010350.1-201ENST00000504908 231 ntBASIC5.42□□□□□ -1.54
ERVFC1P60507 AC025674.1-201ENST00000507074 324 ntBASIC5.42□□□□□ -1.54
ERVFC1P60507 SNORA40.12-201ENST00000516329 111 ntBASIC5.42□□□□□ -1.54
ERVFC1P60507 Vault.3-201ENST00000516676 95 ntBASIC5.42□□□□□ -1.54
ERVFC1P60507 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.42□□□□□ -1.54
ERVFC1P60507 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
ERVFC1P60507 AC023050.3-201ENST00000541142 333 ntBASIC5.42□□□□□ -1.54
ERVFC1P60507 PDCD5P1-201ENST00000543528 309 ntBASIC5.42□□□□□ -1.54
ERVFC1P60507 MIR4675-201ENST00000577898 77 ntBASIC5.42□□□□□ -1.54
ERVFC1P60507 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.42□□□□□ -1.54
ERVFC1P60507 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.42□□□□□ -1.54
ERVFC1P60507 SNRPGP17-201ENST00000603780 214 ntBASIC5.42□□□□□ -1.54
ERVFC1P60507 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.42□□□□□ -1.54
ERVFC1P60507 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.42□□□□□ -1.54
ERVFC1P60507 AC068831.8-201ENST00000620171 435 ntBASIC5.42□□□□□ -1.54
ERVFC1P60507 MIR6758-201ENST00000620653 63 ntBASIC5.42□□□□□ -1.54
ERVFC1P60507 AC100810.6-201ENST00000638068 285 ntBASIC5.42□□□□□ -1.54
ERVFC1P60507 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ERVFC1P60507 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ERVFC1P60507 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
ERVFC1P60507 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.42□□□□□ -1.54
ERVFC1P60507 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ERVFC1P60507 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
ERVFC1P60507 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
ERVFC1P60507 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
ERVFC1P60507 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.42□□□□□ -1.54
ERVFC1P60507 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
ERVFC1P60507 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ERVFC1P60507 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
ERVFC1P60507 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.41□□□□□ -1.54
ERVFC1P60507 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.41□□□□□ -1.54
ERVFC1P60507 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.41□□□□□ -1.54
ERVFC1P60507 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
ERVFC1P60507 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ERVFC1P60507 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
ERVFC1P60507 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
ERVFC1P60507 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ERVFC1P60507 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ERVFC1P60507 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
ERVFC1P60507 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
ERVFC1P60507 AC092681.1-201ENST00000297369 291 ntBASIC5.41□□□□□ -1.54
ERVFC1P60507 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
ERVFC1P60507 RNU6-1120P-201ENST00000362988 108 ntBASIC5.41□□□□□ -1.54
ERVFC1P60507 Y_RNA.146-201ENST00000363549 102 ntBASIC5.41□□□□□ -1.54
ERVFC1P60507 Y_RNA.202-201ENST00000364083 110 ntBASIC5.41□□□□□ -1.54
ERVFC1P60507 RNU1-74P-201ENST00000384108 171 ntBASIC5.41□□□□□ -1.54
ERVFC1P60507 RPL23AP32-201ENST00000395315 459 ntBASIC5.41□□□□□ -1.54
ERVFC1P60507 HMGB1P17-201ENST00000403495 628 ntBASIC5.41□□□□□ -1.54
ERVFC1P60507 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
ERVFC1P60507 RNA5SP113-201ENST00000410486 84 ntBASIC5.41□□□□□ -1.54
ERVFC1P60507 RNU6-1068P-201ENST00000410958 103 ntBASIC5.41□□□□□ -1.54
ERVFC1P60507 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC5.41□□□□□ -1.54
ERVFC1P60507 AL161631.1-201ENST00000417933 486 ntBASIC5.41□□□□□ -1.54
ERVFC1P60507 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.41□□□□□ -1.54
ERVFC1P60507 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.41□□□□□ -1.54
ERVFC1P60507 BX323845.1-201ENST00000432417 179 ntBASIC5.41□□□□□ -1.54
ERVFC1P60507 AL606489.2-201ENST00000433886 234 ntBASIC5.41□□□□□ -1.54
ERVFC1P60507 RSU1P2-202ENST00000437884 485 ntBASIC5.41□□□□□ -1.54
ERVFC1P60507 AC016691.1-201ENST00000441321 413 ntBASIC5.41□□□□□ -1.54
ERVFC1P60507 SNORD19B-201ENST00000459623 84 ntBASIC5.41□□□□□ -1.54
ERVFC1P60507 RN7SL189P-201ENST00000468631 289 ntBASIC5.41□□□□□ -1.54
ERVFC1P60507 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.41□□□□□ -1.54
ERVFC1P60507 HMGN1P9-201ENST00000515212 298 ntBASIC5.41□□□□□ -1.54
ERVFC1P60507 SNORD60.2-201ENST00000516883 86 ntBASIC5.41□□□□□ -1.54
ERVFC1P60507 RNU6-201P-201ENST00000517100 61 ntBASIC5.41□□□□□ -1.54
ERVFC1P60507 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.41□□□□□ -1.54
ERVFC1P60507 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.41□□□□□ -1.54
ERVFC1P60507 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.41□□□□□ -1.54
ERVFC1P60507 AP003072.2-201ENST00000527756 676 ntBASIC5.41□□□□□ -1.54
ERVFC1P60507 AP003181.2-201ENST00000528941 181 ntBASIC5.41□□□□□ -1.54
ERVFC1P60507 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.41□□□□□ -1.54
ERVFC1P60507 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.41□□□□□ -1.54
ERVFC1P60507 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.41□□□□□ -1.54
ERVFC1P60507 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5.41□□□□□ -1.54
ERVFC1P60507 AC108738.1-201ENST00000603703 237 ntBASIC5.41□□□□□ -1.54
ERVFC1P60507 AL391358.1-201ENST00000605342 190 ntBASIC5.41□□□□□ -1.54
ERVFC1P60507 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.41□□□□□ -1.54
ERVFC1P60507 AL139124.1-201ENST00000609123 421 ntBASIC5.41□□□□□ -1.54
ERVFC1P60507 MIR7973-1-201ENST00000614683 76 ntBASIC5.41□□□□□ -1.54
ERVFC1P60507 AC015712.7-201ENST00000615211 635 ntBASIC5.41□□□□□ -1.54
ERVFC1P60507 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
ERVFC1P60507 AL356585.4-201ENST00000623078 1229 ntBASIC5.41□□□□□ -1.54
ERVFC1P60507 AC009161.2-201ENST00000624626 138 ntBASIC5.41□□□□□ -1.54
ERVFC1P60507 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.41□□□□□ -1.54
ERVFC1P60507 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
ERVFC1P60507 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ERVFC1P60507 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
ERVFC1P60507 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ERVFC1P60507 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.41□□□□□ -1.54
ERVFC1P60507 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.41□□□□□ -1.54
ERVFC1P60507 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms