Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC011492.1-201ENST00000600023 315 ntBASIC3.2□□□□□ -1.9
VSX2P58304 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.2□□□□□ -1.9
VSX2P58304 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.2□□□□□ -1.9
VSX2P58304 AL163051.2-201ENST00000618976 735 ntBASIC3.2□□□□□ -1.9
VSX2P58304 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.2□□□□□ -1.9
VSX2P58304 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.2□□□□□ -1.9
VSX2P58304 MTND4P8-201ENST00000514997 1362 ntBASIC3.2□□□□□ -1.9
VSX2P58304 Z83843.1-201ENST00000604070 3685 ntBASIC3.2□□□□□ -1.9
VSX2P58304 AL356274.2-201ENST00000624379 3752 ntBASIC3.2□□□□□ -1.9
VSX2P58304 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
VSX2P58304 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
VSX2P58304 NSRP1P1-201ENST00000444067 1693 ntBASIC3.2□□□□□ -1.9
VSX2P58304 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
VSX2P58304 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
VSX2P58304 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
VSX2P58304 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.19□□□□□ -1.9
VSX2P58304 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
VSX2P58304 ENSAP3-201ENST00000312710 333 ntBASIC3.19□□□□□ -1.9
VSX2P58304 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.19□□□□□ -1.9
VSX2P58304 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.19□□□□□ -1.9
VSX2P58304 RNU6-55P-201ENST00000411092 107 ntBASIC3.19□□□□□ -1.9
VSX2P58304 RNU6-954P-201ENST00000411355 107 ntBASIC3.19□□□□□ -1.9
VSX2P58304 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.19□□□□□ -1.9
VSX2P58304 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.19□□□□□ -1.9
VSX2P58304 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.19□□□□□ -1.9
VSX2P58304 AL356968.1-201ENST00000416622 474 ntBASIC3.19□□□□□ -1.9
VSX2P58304 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.19□□□□□ -1.9
VSX2P58304 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.19□□□□□ -1.9
VSX2P58304 AC005300.1-201ENST00000428401 373 ntBASIC3.19□□□□□ -1.9
VSX2P58304 BX679664.1-201ENST00000434429 253 ntBASIC3.19□□□□□ -1.9
VSX2P58304 AL590762.3-201ENST00000436372 640 ntBASIC3.19□□□□□ -1.9
VSX2P58304 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.19□□□□□ -1.9
VSX2P58304 HMGB1P48-201ENST00000446155 598 ntBASIC3.19□□□□□ -1.9
VSX2P58304 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.19□□□□□ -1.9
VSX2P58304 RN7SL442P-201ENST00000473804 320 ntBASIC3.19□□□□□ -1.9
VSX2P58304 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.19□□□□□ -1.9
VSX2P58304 AC021678.1-201ENST00000505195 936 ntBASIC3.19□□□□□ -1.9
VSX2P58304 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.19□□□□□ -1.9
VSX2P58304 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.19□□□□□ -1.9
VSX2P58304 RN7SKP234-201ENST00000517173 224 ntBASIC3.19□□□□□ -1.9
VSX2P58304 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.19□□□□□ -1.9
VSX2P58304 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.19□□□□□ -1.9
VSX2P58304 UBE2NP1-201ENST00000545592 458 ntBASIC3.19□□□□□ -1.9
VSX2P58304 AC005476.1-201ENST00000554427 397 ntBASIC3.19□□□□□ -1.9
VSX2P58304 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.19□□□□□ -1.9
VSX2P58304 AC037471.2-201ENST00000564941 598 ntBASIC3.19□□□□□ -1.9
VSX2P58304 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.19□□□□□ -1.9
VSX2P58304 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.19□□□□□ -1.9
VSX2P58304 AC015917.1-201ENST00000579654 510 ntBASIC3.19□□□□□ -1.9
VSX2P58304 MIR5195-201ENST00000583555 115 ntBASIC3.19□□□□□ -1.9
VSX2P58304 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.19□□□□□ -1.9
VSX2P58304 AL031985.2-201ENST00000600955 480 ntBASIC3.19□□□□□ -1.9
VSX2P58304 AC079880.2-201ENST00000603790 1213 ntBASIC3.19□□□□□ -1.9
VSX2P58304 AC099778.2-201ENST00000610904 211 ntBASIC3.19□□□□□ -1.9
VSX2P58304 AL359535.1-201ENST00000612100 1087 ntBASIC3.19□□□□□ -1.9
VSX2P58304 AL354976.1-201ENST00000613843 387 ntBASIC3.19□□□□□ -1.9
VSX2P58304 AL118556.2-201ENST00000614375 824 ntBASIC3.19□□□□□ -1.9
VSX2P58304 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.19□□□□□ -1.9
VSX2P58304 MIR6864-201ENST00000617935 70 ntBASIC3.19□□□□□ -1.9
VSX2P58304 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
VSX2P58304 AC018816.2-201ENST00000621460 353 ntBASIC3.19□□□□□ -1.9
VSX2P58304 PLCE1P1-201ENST00000622094 305 ntBASIC3.19□□□□□ -1.9
VSX2P58304 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
VSX2P58304 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
VSX2P58304 CR383658.2-201ENST00000547576 1525 ntBASIC3.19□□□□□ -1.9
VSX2P58304 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
VSX2P58304 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VSX2P58304 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
VSX2P58304 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
VSX2P58304 RNA5SP27-201ENST00000363839 119 ntBASIC3.18□□□□□ -1.9
VSX2P58304 RPL17P50-201ENST00000396131 546 ntBASIC3.18□□□□□ -1.9
VSX2P58304 HMGN1P24-201ENST00000412282 298 ntBASIC3.18□□□□□ -1.9
VSX2P58304 RPS7P13-201ENST00000413955 498 ntBASIC3.18□□□□□ -1.9
VSX2P58304 TATDN1P1-201ENST00000414123 891 ntBASIC3.18□□□□□ -1.9
VSX2P58304 AL445183.3-201ENST00000414168 502 ntBASIC3.18□□□□□ -1.9
VSX2P58304 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.18□□□□□ -1.9
VSX2P58304 AC005326.1-201ENST00000429197 123 ntBASIC3.18□□□□□ -1.9
VSX2P58304 YWHAZP8-201ENST00000436935 731 ntBASIC3.18□□□□□ -1.9
VSX2P58304 AC092685.1-201ENST00000447960 1243 ntBASIC3.18□□□□□ -1.9
VSX2P58304 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
VSX2P58304 CYCSP20-201ENST00000473154 315 ntBASIC3.18□□□□□ -1.9
VSX2P58304 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.18□□□□□ -1.9
VSX2P58304 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.18□□□□□ -1.9
VSX2P58304 AC010265.1-201ENST00000513509 211 ntBASIC3.18□□□□□ -1.9
VSX2P58304 SETP12-201ENST00000514068 805 ntBASIC3.18□□□□□ -1.9
VSX2P58304 RN7SKP277-201ENST00000516895 283 ntBASIC3.18□□□□□ -1.9
VSX2P58304 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.18□□□□□ -1.9
VSX2P58304 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.18□□□□□ -1.9
VSX2P58304 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.18□□□□□ -1.9
VSX2P58304 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.18□□□□□ -1.9
VSX2P58304 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.18□□□□□ -1.9
VSX2P58304 AC125494.3-201ENST00000602759 455 ntBASIC3.18□□□□□ -1.9
VSX2P58304 OR2BH1P-201ENST00000608850 864 ntBASIC3.18□□□□□ -1.9
VSX2P58304 AL442067.2-201ENST00000614033 363 ntBASIC3.18□□□□□ -1.9
VSX2P58304 AL356321.1-201ENST00000621360 228 ntBASIC3.18□□□□□ -1.9
VSX2P58304 AC091953.5-201ENST00000622919 233 ntBASIC3.18□□□□□ -1.9
VSX2P58304 AC024595.1-201ENST00000623088 387 ntBASIC3.18□□□□□ -1.9
VSX2P58304 AC048347.1-201ENST00000624621 427 ntBASIC3.18□□□□□ -1.9
VSX2P58304 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.18□□□□□ -1.9
VSX2P58304 SNORA50A-202ENST00000629536 136 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms