Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PKNOX1P55347 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PKNOX1P55347 HSPE1P26-201ENST00000405341 275 ntBASIC3.33□□□□□ -1.88
PKNOX1P55347 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.33□□□□□ -1.88
PKNOX1P55347 RN7SKP263-201ENST00000411194 309 ntBASIC3.33□□□□□ -1.88
PKNOX1P55347 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.33□□□□□ -1.88
PKNOX1P55347 RPL31P2-201ENST00000413849 377 ntBASIC3.33□□□□□ -1.88
PKNOX1P55347 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.33□□□□□ -1.88
PKNOX1P55347 AC008280.1-201ENST00000418851 412 ntBASIC3.33□□□□□ -1.88
PKNOX1P55347 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.33□□□□□ -1.88
PKNOX1P55347 AC009237.2-201ENST00000421358 284 ntBASIC3.33□□□□□ -1.88
PKNOX1P55347 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.33□□□□□ -1.88
PKNOX1P55347 BX890604.2-201ENST00000427883 474 ntBASIC3.33□□□□□ -1.88
PKNOX1P55347 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.33□□□□□ -1.88
PKNOX1P55347 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.33□□□□□ -1.88
PKNOX1P55347 RRM2P4-201ENST00000441721 562 ntBASIC3.33□□□□□ -1.88
PKNOX1P55347 U3.44-201ENST00000458938 192 ntBASIC3.33□□□□□ -1.88
PKNOX1P55347 AC087879.1-201ENST00000474343 374 ntBASIC3.33□□□□□ -1.88
PKNOX1P55347 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.33□□□□□ -1.88
PKNOX1P55347 RNU6-488P-201ENST00000515918 99 ntBASIC3.33□□□□□ -1.88
PKNOX1P55347 SNORA26.10-201ENST00000516427 141 ntBASIC3.33□□□□□ -1.88
PKNOX1P55347 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.33□□□□□ -1.88
PKNOX1P55347 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.33□□□□□ -1.88
PKNOX1P55347 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.33□□□□□ -1.88
PKNOX1P55347 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.33□□□□□ -1.88
PKNOX1P55347 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.33□□□□□ -1.88
PKNOX1P55347 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.33□□□□□ -1.88
PKNOX1P55347 MTND4LP25-201ENST00000570218 163 ntBASIC3.33□□□□□ -1.88
PKNOX1P55347 AP002906.1-201ENST00000603405 233 ntBASIC3.33□□□□□ -1.88
PKNOX1P55347 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.33□□□□□ -1.88
PKNOX1P55347 AC018754.1-201ENST00000607486 925 ntBASIC3.33□□□□□ -1.88
PKNOX1P55347 AC068880.4-201ENST00000623082 495 ntBASIC3.33□□□□□ -1.88
PKNOX1P55347 AC048347.1-201ENST00000624621 427 ntBASIC3.33□□□□□ -1.88
PKNOX1P55347 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.33□□□□□ -1.88
PKNOX1P55347 PABPC1P7-201ENST00000413177 1513 ntBASIC3.33□□□□□ -1.88
PKNOX1P55347 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
PKNOX1P55347 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.32□□□□□ -1.88
PKNOX1P55347 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PKNOX1P55347 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PKNOX1P55347 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PKNOX1P55347 SNORD56.3-201ENST00000363507 71 ntBASIC3.32□□□□□ -1.88
PKNOX1P55347 SNORA73.2-201ENST00000364946 201 ntBASIC3.32□□□□□ -1.88
PKNOX1P55347 RNU6-805P-201ENST00000365643 106 ntBASIC3.32□□□□□ -1.88
PKNOX1P55347 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.32□□□□□ -1.88
PKNOX1P55347 RNA5SP293-201ENST00000410527 113 ntBASIC3.32□□□□□ -1.88
PKNOX1P55347 Z99755.1-201ENST00000414048 380 ntBASIC3.32□□□□□ -1.88
PKNOX1P55347 AL356968.1-201ENST00000416622 474 ntBASIC3.32□□□□□ -1.88
PKNOX1P55347 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.32□□□□□ -1.88
PKNOX1P55347 UBE2V1P6-201ENST00000430840 422 ntBASIC3.32□□□□□ -1.88
PKNOX1P55347 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.32□□□□□ -1.88
PKNOX1P55347 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.32□□□□□ -1.88
PKNOX1P55347 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.32□□□□□ -1.88
PKNOX1P55347 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.32□□□□□ -1.88
PKNOX1P55347 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.32□□□□□ -1.88
PKNOX1P55347 AL050341.1-201ENST00000447743 313 ntBASIC3.32□□□□□ -1.88
PKNOX1P55347 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.32□□□□□ -1.88
PKNOX1P55347 AC073387.1-201ENST00000453261 709 ntBASIC3.32□□□□□ -1.88
PKNOX1P55347 RPS27P29-201ENST00000463110 252 ntBASIC3.32□□□□□ -1.88
PKNOX1P55347 RPL23AP44-201ENST00000482216 473 ntBASIC3.32□□□□□ -1.88
PKNOX1P55347 RPL31P13-201ENST00000484151 370 ntBASIC3.32□□□□□ -1.88
PKNOX1P55347 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.32□□□□□ -1.88
PKNOX1P55347 AC114967.1-201ENST00000504890 259 ntBASIC3.32□□□□□ -1.88
PKNOX1P55347 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.32□□□□□ -1.88
PKNOX1P55347 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.32□□□□□ -1.88
PKNOX1P55347 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.32□□□□□ -1.88
PKNOX1P55347 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.32□□□□□ -1.88
PKNOX1P55347 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.32□□□□□ -1.88
PKNOX1P55347 IGHV3-76-201ENST00000522465 295 ntBASIC3.32□□□□□ -1.88
PKNOX1P55347 OR4R3P-201ENST00000525084 838 ntBASIC3.32□□□□□ -1.88
PKNOX1P55347 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PKNOX1P55347 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.32□□□□□ -1.88
PKNOX1P55347 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.32□□□□□ -1.88
PKNOX1P55347 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.32□□□□□ -1.88
PKNOX1P55347 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PKNOX1P55347 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.32□□□□□ -1.88
PKNOX1P55347 NIFKP8-201ENST00000560500 874 ntBASIC3.32□□□□□ -1.88
PKNOX1P55347 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.32□□□□□ -1.88
PKNOX1P55347 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.32□□□□□ -1.88
PKNOX1P55347 AC067852.3-201ENST00000589177 561 ntBASIC3.32□□□□□ -1.88
PKNOX1P55347 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.32□□□□□ -1.88
PKNOX1P55347 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.32□□□□□ -1.88
PKNOX1P55347 BX323046.1-201ENST00000610145 535 ntBASIC3.32□□□□□ -1.88
PKNOX1P55347 AC084824.5-201ENST00000612009 413 ntBASIC3.32□□□□□ -1.88
PKNOX1P55347 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
PKNOX1P55347 AC018816.2-201ENST00000621460 353 ntBASIC3.32□□□□□ -1.88
PKNOX1P55347 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.32□□□□□ -1.88
PKNOX1P55347 AL121594.5-201ENST00000631724 573 ntBASIC3.32□□□□□ -1.88
PKNOX1P55347 AL590396.4-201ENST00000636779 956 ntBASIC3.32□□□□□ -1.88
PKNOX1P55347 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PKNOX1P55347 AL122126.1-201ENST00000546905 1318 ntBASIC3.32□□□□□ -1.88
PKNOX1P55347 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
PKNOX1P55347 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
PKNOX1P55347 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.32□□□□□ -1.88
PKNOX1P55347 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PKNOX1P55347 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.32□□□□□ -1.88
PKNOX1P55347 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PKNOX1P55347 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.32□□□□□ -1.88
PKNOX1P55347 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
PKNOX1P55347 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PKNOX1P55347 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms