Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HMGCS2P54868 RNU6-207P-201ENST00000384137 107 ntBASIC3.79□□□□□ -1.8
HMGCS2P54868 SNORA44-201ENST00000384584 132 ntBASIC3.79□□□□□ -1.8
HMGCS2P54868 AC126124.2-201ENST00000413542 321 ntBASIC3.79□□□□□ -1.8
HMGCS2P54868 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.79□□□□□ -1.8
HMGCS2P54868 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.79□□□□□ -1.8
HMGCS2P54868 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.79□□□□□ -1.8
HMGCS2P54868 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.79□□□□□ -1.8
HMGCS2P54868 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HMGCS2P54868 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HMGCS2P54868 RPS6P4-201ENST00000494693 758 ntBASIC3.79□□□□□ -1.8
HMGCS2P54868 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
HMGCS2P54868 VWA8P1-201ENST00000510889 176 ntBASIC3.79□□□□□ -1.8
HMGCS2P54868 RN7SKP82-201ENST00000516786 223 ntBASIC3.79□□□□□ -1.8
HMGCS2P54868 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.79□□□□□ -1.8
HMGCS2P54868 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.79□□□□□ -1.8
HMGCS2P54868 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.79□□□□□ -1.8
HMGCS2P54868 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
HMGCS2P54868 AC126365.2-201ENST00000580630 379 ntBASIC3.79□□□□□ -1.8
HMGCS2P54868 RN7SL622P-201ENST00000585292 275 ntBASIC3.79□□□□□ -1.8
HMGCS2P54868 AC115085.1-201ENST00000588924 229 ntBASIC3.79□□□□□ -1.8
HMGCS2P54868 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.79□□□□□ -1.8
HMGCS2P54868 AC104763.3-201ENST00000613765 618 ntBASIC3.79□□□□□ -1.8
HMGCS2P54868 AL157817.1-201ENST00000614264 790 ntBASIC3.79□□□□□ -1.8
HMGCS2P54868 AC103858.2-201ENST00000621471 543 ntBASIC3.79□□□□□ -1.8
HMGCS2P54868 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.79□□□□□ -1.8
HMGCS2P54868 AL356118.1-201ENST00000635272 1078 ntBASIC3.79□□□□□ -1.8
HMGCS2P54868 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.79□□□□□ -1.8
HMGCS2P54868 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
HMGCS2P54868 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.79□□□□□ -1.8
HMGCS2P54868 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HMGCS2P54868 AC025125.1-201ENST00000624743 1922 ntBASIC3.79□□□□□ -1.8
HMGCS2P54868 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HMGCS2P54868 GTF2H2B-203ENST00000508065 1432 ntBASIC3.78□□□□□ -1.8
HMGCS2P54868 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.78□□□□□ -1.8
HMGCS2P54868 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HMGCS2P54868 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.78□□□□□ -1.8
HMGCS2P54868 AC134882.1-201ENST00000603738 1676 ntBASIC3.78□□□□□ -1.8
HMGCS2P54868 CR381670.1-201ENST00000624291 1693 ntBASIC3.78□□□□□ -1.8
HMGCS2P54868 AC018529.3-201ENST00000624212 2254 ntBASIC3.78□□□□□ -1.8
HMGCS2P54868 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.78□□□□□ -1.8
HMGCS2P54868 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HMGCS2P54868 AL645568.2-201ENST00000432815 1337 ntBASIC3.78□□□□□ -1.8
HMGCS2P54868 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.78□□□□□ -1.8
HMGCS2P54868 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HMGCS2P54868 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HMGCS2P54868 METTL21EP-201ENST00000298105 713 ntBASIC3.78□□□□□ -1.8
HMGCS2P54868 U3.15-201ENST00000365398 212 ntBASIC3.78□□□□□ -1.8
HMGCS2P54868 RNU6-468P-201ENST00000384003 109 ntBASIC3.78□□□□□ -1.8
HMGCS2P54868 RNU6-1000P-201ENST00000391066 106 ntBASIC3.78□□□□□ -1.8
HMGCS2P54868 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
HMGCS2P54868 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.78□□□□□ -1.8
HMGCS2P54868 ETF1P3-201ENST00000430422 1160 ntBASIC3.78□□□□□ -1.8
HMGCS2P54868 YWHAEP5-201ENST00000431545 765 ntBASIC3.78□□□□□ -1.8
HMGCS2P54868 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.78□□□□□ -1.8
HMGCS2P54868 AC025750.2-201ENST00000442609 450 ntBASIC3.78□□□□□ -1.8
HMGCS2P54868 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.78□□□□□ -1.8
HMGCS2P54868 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.78□□□□□ -1.8
HMGCS2P54868 HMGB1P38-201ENST00000490557 577 ntBASIC3.78□□□□□ -1.8
HMGCS2P54868 AC111193.1-201ENST00000504097 155 ntBASIC3.78□□□□□ -1.8
HMGCS2P54868 AC097462.2-201ENST00000504623 481 ntBASIC3.78□□□□□ -1.8
HMGCS2P54868 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.78□□□□□ -1.8
HMGCS2P54868 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.78□□□□□ -1.8
HMGCS2P54868 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HMGCS2P54868 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.78□□□□□ -1.8
HMGCS2P54868 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HMGCS2P54868 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.78□□□□□ -1.8
HMGCS2P54868 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.78□□□□□ -1.8
HMGCS2P54868 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.78□□□□□ -1.8
HMGCS2P54868 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.78□□□□□ -1.8
HMGCS2P54868 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HMGCS2P54868 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
HMGCS2P54868 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HMGCS2P54868 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HMGCS2P54868 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HMGCS2P54868 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HMGCS2P54868 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HMGCS2P54868 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
HMGCS2P54868 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.77□□□□□ -1.81
HMGCS2P54868 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HMGCS2P54868 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HMGCS2P54868 OR11H5P-202ENST00000641612 1325 ntBASIC3.77□□□□□ -1.81
HMGCS2P54868 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.77□□□□□ -1.81
HMGCS2P54868 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HMGCS2P54868 RNU6-543P-201ENST00000362576 108 ntBASIC3.77□□□□□ -1.81
HMGCS2P54868 RN7SKP44-201ENST00000363602 316 ntBASIC3.77□□□□□ -1.81
HMGCS2P54868 RNU1-140P-201ENST00000365040 165 ntBASIC3.77□□□□□ -1.81
HMGCS2P54868 MIR122-201ENST00000385044 85 ntBASIC3.77□□□□□ -1.81
HMGCS2P54868 HMGB3P18-201ENST00000406327 590 ntBASIC3.77□□□□□ -1.81
HMGCS2P54868 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.77□□□□□ -1.81
HMGCS2P54868 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.77□□□□□ -1.81
HMGCS2P54868 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.77□□□□□ -1.81
HMGCS2P54868 RPS6P12-201ENST00000432491 726 ntBASIC3.77□□□□□ -1.81
HMGCS2P54868 AL353093.1-201ENST00000441292 436 ntBASIC3.77□□□□□ -1.81
HMGCS2P54868 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.77□□□□□ -1.81
HMGCS2P54868 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.77□□□□□ -1.81
HMGCS2P54868 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HMGCS2P54868 AC090281.1-201ENST00000523019 276 ntBASIC3.77□□□□□ -1.81
HMGCS2P54868 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.77□□□□□ -1.81
HMGCS2P54868 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms