Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 AL162388.1-201ENST00000450912 352 ntBASIC4.12□□□□□ -1.75
MSH6P52701 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.12□□□□□ -1.75
MSH6P52701 OR52A4P-203ENST00000498233 1014 ntBASIC4.12□□□□□ -1.75
MSH6P52701 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
MSH6P52701 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.12□□□□□ -1.75
MSH6P52701 AP000916.1-201ENST00000533869 835 ntBASIC4.12□□□□□ -1.75
MSH6P52701 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.12□□□□□ -1.75
MSH6P52701 AC004832.5-201ENST00000608677 401 ntBASIC4.12□□□□□ -1.75
MSH6P52701 AC019131.2-201ENST00000609071 870 ntBASIC4.12□□□□□ -1.75
MSH6P52701 AL356274.1-201ENST00000617064 410 ntBASIC4.12□□□□□ -1.75
MSH6P52701 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.12□□□□□ -1.75
MSH6P52701 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.12□□□□□ -1.75
MSH6P52701 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
MSH6P52701 AC008725.1-201ENST00000605123 2263 ntBASIC4.12□□□□□ -1.75
MSH6P52701 AC093311.1-201ENST00000506586 2021 ntBASIC4.11□□□□□ -1.75
MSH6P52701 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
MSH6P52701 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
MSH6P52701 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
MSH6P52701 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
MSH6P52701 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.11□□□□□ -1.75
MSH6P52701 AL513477.1-202ENST00000417061 214 ntBASIC4.11□□□□□ -1.75
MSH6P52701 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.11□□□□□ -1.75
MSH6P52701 MRPS33P4-201ENST00000434892 317 ntBASIC4.11□□□□□ -1.75
MSH6P52701 RPL37P4-201ENST00000448908 268 ntBASIC4.11□□□□□ -1.75
MSH6P52701 AC022784.5-201ENST00000522241 437 ntBASIC4.11□□□□□ -1.75
MSH6P52701 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.11□□□□□ -1.75
MSH6P52701 OR5G4P-201ENST00000525251 760 ntBASIC4.11□□□□□ -1.75
MSH6P52701 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
MSH6P52701 AC009268.1-201ENST00000561352 1203 ntBASIC4.11□□□□□ -1.75
MSH6P52701 AC096947.1-201ENST00000603233 470 ntBASIC4.11□□□□□ -1.75
MSH6P52701 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
MSH6P52701 AC110792.3-201ENST00000595906 1614 ntBASIC4.1□□□□□ -1.75
MSH6P52701 PWAR6-201ENST00000552334 4618 ntBASIC4.1□□□□□ -1.75
MSH6P52701 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.1□□□□□ -1.75
MSH6P52701 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
MSH6P52701 RNU6-618P-201ENST00000363518 112 ntBASIC4.1□□□□□ -1.75
MSH6P52701 RNU6-819P-201ENST00000364116 107 ntBASIC4.1□□□□□ -1.75
MSH6P52701 SNORA9.2-201ENST00000365361 133 ntBASIC4.1□□□□□ -1.75
MSH6P52701 MT-TP-201ENST00000387461 68 ntBASIC4.1□□□□□ -1.75
MSH6P52701 DHFRP5-201ENST00000406944 564 ntBASIC4.1□□□□□ -1.75
MSH6P52701 AL592148.1-201ENST00000413568 445 ntBASIC4.1□□□□□ -1.75
MSH6P52701 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.1□□□□□ -1.75
MSH6P52701 FTH1P6-201ENST00000430768 320 ntBASIC4.1□□□□□ -1.75
MSH6P52701 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.1□□□□□ -1.75
MSH6P52701 AC022431.1-201ENST00000450941 438 ntBASIC4.1□□□□□ -1.75
MSH6P52701 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.1□□□□□ -1.75
MSH6P52701 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.1□□□□□ -1.75
MSH6P52701 RPS3P1-201ENST00000456781 192 ntBASIC4.1□□□□□ -1.75
MSH6P52701 RPL31P13-201ENST00000484151 370 ntBASIC4.1□□□□□ -1.75
MSH6P52701 AC008549.1-201ENST00000512900 643 ntBASIC4.1□□□□□ -1.75
MSH6P52701 RNU1-143P-201ENST00000516296 146 ntBASIC4.1□□□□□ -1.75
MSH6P52701 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
MSH6P52701 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.1□□□□□ -1.75
MSH6P52701 AC008507.1-201ENST00000587506 734 ntBASIC4.1□□□□□ -1.75
MSH6P52701 U1.23-201ENST00000610293 146 ntBASIC4.1□□□□□ -1.75
MSH6P52701 RNU1-68P-201ENST00000615382 146 ntBASIC4.1□□□□□ -1.75
MSH6P52701 U1.39-201ENST00000621562 146 ntBASIC4.1□□□□□ -1.75
MSH6P52701 AC091903.1-201ENST00000624322 454 ntBASIC4.1□□□□□ -1.75
MSH6P52701 AC073476.4-201ENST00000628409 72 ntBASIC4.1□□□□□ -1.75
MSH6P52701 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.1□□□□□ -1.75
MSH6P52701 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
MSH6P52701 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.09□□□□□ -1.75
MSH6P52701 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.09□□□□□ -1.75
MSH6P52701 AC110754.1-201ENST00000399740 601 ntBASIC4.09□□□□□ -1.75
MSH6P52701 RPL7P8-201ENST00000411964 730 ntBASIC4.09□□□□□ -1.75
MSH6P52701 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.09□□□□□ -1.75
MSH6P52701 AC105402.1-201ENST00000413336 545 ntBASIC4.09□□□□□ -1.75
MSH6P52701 RPL23AP4-201ENST00000427757 463 ntBASIC4.09□□□□□ -1.75
MSH6P52701 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.09□□□□□ -1.75
MSH6P52701 HMGB3P11-201ENST00000440127 604 ntBASIC4.09□□□□□ -1.75
MSH6P52701 CALM1P2-201ENST00000452941 448 ntBASIC4.09□□□□□ -1.75
MSH6P52701 ANXA2P1-201ENST00000505539 926 ntBASIC4.09□□□□□ -1.75
MSH6P52701 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.09□□□□□ -1.75
MSH6P52701 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.09□□□□□ -1.75
MSH6P52701 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.09□□□□□ -1.75
MSH6P52701 AC098826.3-201ENST00000603823 466 ntBASIC4.09□□□□□ -1.75
MSH6P52701 AL365400.2-201ENST00000605604 902 ntBASIC4.09□□□□□ -1.75
MSH6P52701 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.09□□□□□ -1.75
MSH6P52701 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
MSH6P52701 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.08□□□□□ -1.76
MSH6P52701 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.08□□□□□ -1.76
MSH6P52701 RNU6-304P-201ENST00000364855 107 ntBASIC4.08□□□□□ -1.76
MSH6P52701 SNORA67.4-201ENST00000384688 142 ntBASIC4.08□□□□□ -1.76
MSH6P52701 SNORD65-201ENST00000391079 73 ntBASIC4.08□□□□□ -1.76
MSH6P52701 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.08□□□□□ -1.76
MSH6P52701 BUD31P2-201ENST00000449374 300 ntBASIC4.08□□□□□ -1.76
MSH6P52701 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.08□□□□□ -1.76
MSH6P52701 NIPA2P2-201ENST00000496376 1083 ntBASIC4.08□□□□□ -1.76
MSH6P52701 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.08□□□□□ -1.76
MSH6P52701 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.08□□□□□ -1.76
MSH6P52701 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.08□□□□□ -1.76
MSH6P52701 AC034236.3-201ENST00000605999 461 ntBASIC4.08□□□□□ -1.76
MSH6P52701 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.08□□□□□ -1.76
MSH6P52701 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
MSH6P52701 AC093010.3-201ENST00000570269 15214 ntBASIC4.08□□□□□ -1.76
MSH6P52701 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
MSH6P52701 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
MSH6P52701 AL353692.2-201ENST00000407054 335 ntBASIC4.07□□□□□ -1.76
MSH6P52701 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
MSH6P52701 AC244453.4-201ENST00000419150 388 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms