Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 RNU6-1293P-201ENST00000384077 107 ntBASIC4.07□□□□□ -1.76
CLCNKAP51800 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.07□□□□□ -1.76
CLCNKAP51800 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.07□□□□□ -1.76
CLCNKAP51800 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.07□□□□□ -1.76
CLCNKAP51800 AC008280.1-201ENST00000418851 412 ntBASIC4.07□□□□□ -1.76
CLCNKAP51800 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.07□□□□□ -1.76
CLCNKAP51800 IFNNP1-201ENST00000429219 553 ntBASIC4.07□□□□□ -1.76
CLCNKAP51800 OR4C10P-201ENST00000434991 931 ntBASIC4.07□□□□□ -1.76
CLCNKAP51800 MTND4P32-201ENST00000437189 1237 ntBASIC4.07□□□□□ -1.76
CLCNKAP51800 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.07□□□□□ -1.76
CLCNKAP51800 RSL24D1P3-201ENST00000449255 495 ntBASIC4.07□□□□□ -1.76
CLCNKAP51800 RAD23BP3-201ENST00000454157 1152 ntBASIC4.07□□□□□ -1.76
CLCNKAP51800 AC079804.1-201ENST00000461922 436 ntBASIC4.07□□□□□ -1.76
CLCNKAP51800 RPL7P1-201ENST00000468161 747 ntBASIC4.07□□□□□ -1.76
CLCNKAP51800 RPL7P9-201ENST00000468715 747 ntBASIC4.07□□□□□ -1.76
CLCNKAP51800 BZW1P2-201ENST00000473537 826 ntBASIC4.07□□□□□ -1.76
CLCNKAP51800 MTCO1P30-201ENST00000515244 580 ntBASIC4.07□□□□□ -1.76
CLCNKAP51800 RNU6-1261P-201ENST00000517194 104 ntBASIC4.07□□□□□ -1.76
CLCNKAP51800 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.07□□□□□ -1.76
CLCNKAP51800 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.07□□□□□ -1.76
CLCNKAP51800 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.07□□□□□ -1.76
CLCNKAP51800 AC007424.1-203ENST00000554613 687 ntBASIC4.07□□□□□ -1.76
CLCNKAP51800 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.07□□□□□ -1.76
CLCNKAP51800 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.07□□□□□ -1.76
CLCNKAP51800 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.07□□□□□ -1.76
CLCNKAP51800 AC090616.2-202ENST00000584248 222 ntBASIC4.07□□□□□ -1.76
CLCNKAP51800 RNU4-89P-201ENST00000607443 133 ntBASIC4.07□□□□□ -1.76
CLCNKAP51800 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.07□□□□□ -1.76
CLCNKAP51800 MIR6867-201ENST00000610636 67 ntBASIC4.07□□□□□ -1.76
CLCNKAP51800 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.07□□□□□ -1.76
CLCNKAP51800 AC078899.5-201ENST00000612475 178 ntBASIC4.07□□□□□ -1.76
CLCNKAP51800 AL713922.2-201ENST00000619384 716 ntBASIC4.07□□□□□ -1.76
CLCNKAP51800 RNU6-156P-201ENST00000621869 107 ntBASIC4.07□□□□□ -1.76
CLCNKAP51800 AP005264.7-201ENST00000625003 745 ntBASIC4.07□□□□□ -1.76
CLCNKAP51800 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CLCNKAP51800 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLCNKAP51800 AC008725.1-201ENST00000605123 2263 ntBASIC4.07□□□□□ -1.76
CLCNKAP51800 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.07□□□□□ -1.76
CLCNKAP51800 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLCNKAP51800 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CLCNKAP51800 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
CLCNKAP51800 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLCNKAP51800 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLCNKAP51800 AC116667.1-201ENST00000604855 2072 ntBASIC4.06□□□□□ -1.76
CLCNKAP51800 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLCNKAP51800 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.06□□□□□ -1.76
CLCNKAP51800 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.06□□□□□ -1.76
CLCNKAP51800 RNU6-657P-201ENST00000383904 107 ntBASIC4.06□□□□□ -1.76
CLCNKAP51800 SNORD116-1-201ENST00000384335 95 ntBASIC4.06□□□□□ -1.76
CLCNKAP51800 MIR153-1-201ENST00000384914 90 ntBASIC4.06□□□□□ -1.76
CLCNKAP51800 RNU11-4P-201ENST00000391149 133 ntBASIC4.06□□□□□ -1.76
CLCNKAP51800 DSTNP4-201ENST00000399472 474 ntBASIC4.06□□□□□ -1.76
CLCNKAP51800 PPIAP31-201ENST00000405422 495 ntBASIC4.06□□□□□ -1.76
CLCNKAP51800 RN7SKP263-201ENST00000411194 309 ntBASIC4.06□□□□□ -1.76
CLCNKAP51800 AL022400.1-201ENST00000423946 935 ntBASIC4.06□□□□□ -1.76
CLCNKAP51800 RPL31P54-201ENST00000429803 370 ntBASIC4.06□□□□□ -1.76
CLCNKAP51800 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.06□□□□□ -1.76
CLCNKAP51800 RPL36P19-201ENST00000430744 301 ntBASIC4.06□□□□□ -1.76
CLCNKAP51800 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.06□□□□□ -1.76
CLCNKAP51800 B3GNT2P1-201ENST00000434960 952 ntBASIC4.06□□□□□ -1.76
CLCNKAP51800 AL356276.2-201ENST00000435919 558 ntBASIC4.06□□□□□ -1.76
CLCNKAP51800 RPL23AP89-201ENST00000439324 255 ntBASIC4.06□□□□□ -1.76
CLCNKAP51800 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.06□□□□□ -1.76
CLCNKAP51800 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.06□□□□□ -1.76
CLCNKAP51800 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.06□□□□□ -1.76
CLCNKAP51800 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.06□□□□□ -1.76
CLCNKAP51800 RPL36AP13-201ENST00000457490 317 ntBASIC4.06□□□□□ -1.76
CLCNKAP51800 HMGB3P30-201ENST00000457863 606 ntBASIC4.06□□□□□ -1.76
CLCNKAP51800 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.06□□□□□ -1.76
CLCNKAP51800 AC146507.1-201ENST00000468335 354 ntBASIC4.06□□□□□ -1.76
CLCNKAP51800 MTND3P7-201ENST00000474435 343 ntBASIC4.06□□□□□ -1.76
CLCNKAP51800 RPS3AP43-201ENST00000479743 781 ntBASIC4.06□□□□□ -1.76
CLCNKAP51800 NCOR1P1-202ENST00000486162 291 ntBASIC4.06□□□□□ -1.76
CLCNKAP51800 OR4G11P-201ENST00000492842 939 ntBASIC4.06□□□□□ -1.76
CLCNKAP51800 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.06□□□□□ -1.76
CLCNKAP51800 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.06□□□□□ -1.76
CLCNKAP51800 AC111000.2-201ENST00000507775 550 ntBASIC4.06□□□□□ -1.76
CLCNKAP51800 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.06□□□□□ -1.76
CLCNKAP51800 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.06□□□□□ -1.76
CLCNKAP51800 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.06□□□□□ -1.76
CLCNKAP51800 FTH1P9-201ENST00000513251 355 ntBASIC4.06□□□□□ -1.76
CLCNKAP51800 MTCO3P28-201ENST00000513351 515 ntBASIC4.06□□□□□ -1.76
CLCNKAP51800 SOD1P3-201ENST00000518682 454 ntBASIC4.06□□□□□ -1.76
CLCNKAP51800 AC027309.2-201ENST00000520566 192 ntBASIC4.06□□□□□ -1.76
CLCNKAP51800 MTCO1P49-201ENST00000523429 802 ntBASIC4.06□□□□□ -1.76
CLCNKAP51800 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.06□□□□□ -1.76
CLCNKAP51800 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.06□□□□□ -1.76
CLCNKAP51800 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.06□□□□□ -1.76
CLCNKAP51800 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
CLCNKAP51800 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.06□□□□□ -1.76
CLCNKAP51800 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.06□□□□□ -1.76
CLCNKAP51800 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.06□□□□□ -1.76
CLCNKAP51800 BNIP3P5-201ENST00000562290 498 ntBASIC4.06□□□□□ -1.76
CLCNKAP51800 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.06□□□□□ -1.76
CLCNKAP51800 ISCA1P3-201ENST00000577104 373 ntBASIC4.06□□□□□ -1.76
CLCNKAP51800 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC4.06□□□□□ -1.76
CLCNKAP51800 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.06□□□□□ -1.76
CLCNKAP51800 AC005255.1-201ENST00000593748 216 ntBASIC4.06□□□□□ -1.76
CLCNKAP51800 AL022161.1-201ENST00000604390 213 ntBASIC4.06□□□□□ -1.76
CLCNKAP51800 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms