Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC139783.2-201ENST00000504847 1145 ntBASIC5.36□□□□□ -1.55
MRE11P49959 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC5.36□□□□□ -1.55
MRE11P49959 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.36□□□□□ -1.55
MRE11P49959 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.36□□□□□ -1.55
MRE11P49959 COX6B1P5-201ENST00000509843 249 ntBASIC5.36□□□□□ -1.55
MRE11P49959 AC116347.2-201ENST00000514912 523 ntBASIC5.36□□□□□ -1.55
MRE11P49959 RNU6-506P-201ENST00000516553 94 ntBASIC5.36□□□□□ -1.55
MRE11P49959 RNA5SP143-201ENST00000516936 115 ntBASIC5.36□□□□□ -1.55
MRE11P49959 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.36□□□□□ -1.55
MRE11P49959 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.36□□□□□ -1.55
MRE11P49959 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC5.36□□□□□ -1.55
MRE11P49959 SERPINE4P-201ENST00000554978 281 ntBASIC5.36□□□□□ -1.55
MRE11P49959 ZNF519P2-201ENST00000557032 169 ntBASIC5.36□□□□□ -1.55
MRE11P49959 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.36□□□□□ -1.55
MRE11P49959 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC5.36□□□□□ -1.55
MRE11P49959 MIR4528-201ENST00000577763 90 ntBASIC5.36□□□□□ -1.55
MRE11P49959 MIR4715-201ENST00000584117 79 ntBASIC5.36□□□□□ -1.55
MRE11P49959 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.36□□□□□ -1.55
MRE11P49959 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC5.36□□□□□ -1.55
MRE11P49959 AC006566.1-201ENST00000608943 513 ntBASIC5.36□□□□□ -1.55
MRE11P49959 AC017083.3-201ENST00000609955 700 ntBASIC5.36□□□□□ -1.55
MRE11P49959 AC116447.1-201ENST00000613153 453 ntBASIC5.36□□□□□ -1.55
MRE11P49959 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.36□□□□□ -1.55
MRE11P49959 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
MRE11P49959 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.36□□□□□ -1.55
MRE11P49959 MTCO1P23-201ENST00000415223 1526 ntBASIC5.36□□□□□ -1.55
MRE11P49959 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
MRE11P49959 AC139713.2-214ENST00000642059 1811 ntBASIC5.36□□□□□ -1.55
MRE11P49959 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
MRE11P49959 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
MRE11P49959 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
MRE11P49959 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC5.35□□□□□ -1.55
MRE11P49959 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.35□□□□□ -1.55
MRE11P49959 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
MRE11P49959 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.35□□□□□ -1.55
MRE11P49959 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.35□□□□□ -1.55
MRE11P49959 AC135352.1-201ENST00000506173 1418 ntBASIC5.35□□□□□ -1.55
MRE11P49959 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
MRE11P49959 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
MRE11P49959 AC007066.1-201ENST00000392902 381 ntBASIC5.35□□□□□ -1.55
MRE11P49959 RPS3AP24-201ENST00000407896 734 ntBASIC5.35□□□□□ -1.55
MRE11P49959 MIR1284-201ENST00000408337 120 ntBASIC5.35□□□□□ -1.55
MRE11P49959 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.35□□□□□ -1.55
MRE11P49959 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
MRE11P49959 AC007559.1-201ENST00000428736 355 ntBASIC5.35□□□□□ -1.55
MRE11P49959 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC5.35□□□□□ -1.55
MRE11P49959 RPL7P11-201ENST00000437586 658 ntBASIC5.35□□□□□ -1.55
MRE11P49959 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.35□□□□□ -1.55
MRE11P49959 VN1R34P-201ENST00000447387 883 ntBASIC5.35□□□□□ -1.55
MRE11P49959 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.35□□□□□ -1.55
MRE11P49959 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC5.35□□□□□ -1.55
MRE11P49959 AL035404.1-201ENST00000497982 568 ntBASIC5.35□□□□□ -1.55
MRE11P49959 AC098799.3-201ENST00000506095 438 ntBASIC5.35□□□□□ -1.55
MRE11P49959 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.35□□□□□ -1.55
MRE11P49959 VWA8P1-201ENST00000510889 176 ntBASIC5.35□□□□□ -1.55
MRE11P49959 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC5.35□□□□□ -1.55
MRE11P49959 RN7SKP298-201ENST00000515950 94 ntBASIC5.35□□□□□ -1.55
MRE11P49959 RNU6-718P-201ENST00000516166 105 ntBASIC5.35□□□□□ -1.55
MRE11P49959 RNA5SP135-201ENST00000517019 125 ntBASIC5.35□□□□□ -1.55
MRE11P49959 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC5.35□□□□□ -1.55
MRE11P49959 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
MRE11P49959 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.35□□□□□ -1.55
MRE11P49959 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.35□□□□□ -1.55
MRE11P49959 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.35□□□□□ -1.55
MRE11P49959 AC093249.4-201ENST00000564755 259 ntBASIC5.35□□□□□ -1.55
MRE11P49959 PCMTD1P2-201ENST00000565017 355 ntBASIC5.35□□□□□ -1.55
MRE11P49959 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.35□□□□□ -1.55
MRE11P49959 MIR4444-1-201ENST00000581696 74 ntBASIC5.35□□□□□ -1.55
MRE11P49959 MIR4444-2-201ENST00000584390 74 ntBASIC5.35□□□□□ -1.55
MRE11P49959 AC091178.1-203ENST00000584586 279 ntBASIC5.35□□□□□ -1.55
MRE11P49959 AC017100.2-201ENST00000584628 355 ntBASIC5.35□□□□□ -1.55
MRE11P49959 MIR548AB-201ENST00000584917 84 ntBASIC5.35□□□□□ -1.55
MRE11P49959 MIR4719-201ENST00000585233 84 ntBASIC5.35□□□□□ -1.55
MRE11P49959 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.35□□□□□ -1.55
MRE11P49959 AC123786.2-201ENST00000603459 275 ntBASIC5.35□□□□□ -1.55
MRE11P49959 AC080013.4-201ENST00000607624 649 ntBASIC5.35□□□□□ -1.55
MRE11P49959 AL031666.3-201ENST00000609320 1006 ntBASIC5.35□□□□□ -1.55
MRE11P49959 AC005332.6-201ENST00000613178 446 ntBASIC5.35□□□□□ -1.55
MRE11P49959 AC090517.2-201ENST00000614966 680 ntBASIC5.35□□□□□ -1.55
MRE11P49959 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.35□□□□□ -1.55
MRE11P49959 AL138721.1-201ENST00000616756 179 ntBASIC5.35□□□□□ -1.55
MRE11P49959 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC5.35□□□□□ -1.55
MRE11P49959 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.35□□□□□ -1.55
MRE11P49959 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
MRE11P49959 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.35□□□□□ -1.55
MRE11P49959 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.35□□□□□ -1.55
MRE11P49959 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
MRE11P49959 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
MRE11P49959 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
MRE11P49959 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
MRE11P49959 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
MRE11P49959 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.34□□□□□ -1.55
MRE11P49959 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.34□□□□□ -1.55
MRE11P49959 RNU6-501P-201ENST00000364072 100 ntBASIC5.34□□□□□ -1.55
MRE11P49959 RNA5SP88-201ENST00000365560 109 ntBASIC5.34□□□□□ -1.55
MRE11P49959 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
MRE11P49959 Y_RNA.390-201ENST00000383932 102 ntBASIC5.34□□□□□ -1.55
MRE11P49959 RN7SKP56-201ENST00000410513 331 ntBASIC5.34□□□□□ -1.55
MRE11P49959 RNU4-25P-201ENST00000410569 230 ntBASIC5.34□□□□□ -1.55
MRE11P49959 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms