Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC008155.2-201ENST00000464337 397 ntBASIC3.38□□□□□ -1.87
RORAP35398 HMGB1P38-201ENST00000490557 577 ntBASIC3.38□□□□□ -1.87
RORAP35398 AL358832.1-201ENST00000497800 389 ntBASIC3.38□□□□□ -1.87
RORAP35398 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.38□□□□□ -1.87
RORAP35398 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.38□□□□□ -1.87
RORAP35398 AC026784.1-201ENST00000507986 352 ntBASIC3.38□□□□□ -1.87
RORAP35398 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.38□□□□□ -1.87
RORAP35398 OR8K2P-201ENST00000524645 927 ntBASIC3.38□□□□□ -1.87
RORAP35398 AP000926.4-201ENST00000527351 454 ntBASIC3.38□□□□□ -1.87
RORAP35398 AL139174.1-201ENST00000531489 886 ntBASIC3.38□□□□□ -1.87
RORAP35398 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RORAP35398 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.38□□□□□ -1.87
RORAP35398 MIR4425-201ENST00000580572 84 ntBASIC3.38□□□□□ -1.87
RORAP35398 IGHV3-29-201ENST00000604817 344 ntBASIC3.38□□□□□ -1.87
RORAP35398 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.38□□□□□ -1.87
RORAP35398 AC046144.1-201ENST00000478559 1853 ntBASIC3.38□□□□□ -1.87
RORAP35398 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RORAP35398 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RORAP35398 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RORAP35398 MTND4P34-201ENST00000572715 1371 ntBASIC3.38□□□□□ -1.87
RORAP35398 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RORAP35398 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RORAP35398 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RORAP35398 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
RORAP35398 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RORAP35398 RNA5SP50-201ENST00000363731 107 ntBASIC3.37□□□□□ -1.87
RORAP35398 RNA5SP27-201ENST00000363839 119 ntBASIC3.37□□□□□ -1.87
RORAP35398 RNU1-33P-201ENST00000364249 162 ntBASIC3.37□□□□□ -1.87
RORAP35398 RNU6-650P-201ENST00000365658 111 ntBASIC3.37□□□□□ -1.87
RORAP35398 RNU6-1181P-201ENST00000384191 106 ntBASIC3.37□□□□□ -1.87
RORAP35398 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RORAP35398 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.37□□□□□ -1.87
RORAP35398 AL121972.1-201ENST00000402023 252 ntBASIC3.37□□□□□ -1.87
RORAP35398 KRR1P1-201ENST00000419430 803 ntBASIC3.37□□□□□ -1.87
RORAP35398 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RORAP35398 AC073310.1-201ENST00000423226 1033 ntBASIC3.37□□□□□ -1.87
RORAP35398 AC005517.2-201ENST00000424673 553 ntBASIC3.37□□□□□ -1.87
RORAP35398 AC006989.1-201ENST00000427212 131 ntBASIC3.37□□□□□ -1.87
RORAP35398 AC093422.3-201ENST00000428506 305 ntBASIC3.37□□□□□ -1.87
RORAP35398 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.37□□□□□ -1.87
RORAP35398 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.37□□□□□ -1.87
RORAP35398 MRPS18BP2-201ENST00000434310 759 ntBASIC3.37□□□□□ -1.87
RORAP35398 RPL23AP83-201ENST00000434984 473 ntBASIC3.37□□□□□ -1.87
RORAP35398 HMGN2P20-201ENST00000437531 273 ntBASIC3.37□□□□□ -1.87
RORAP35398 SKP1P1-201ENST00000438081 489 ntBASIC3.37□□□□□ -1.87
RORAP35398 RPS26P30-201ENST00000443431 335 ntBASIC3.37□□□□□ -1.87
RORAP35398 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.37□□□□□ -1.87
RORAP35398 AL035407.2-201ENST00000454090 378 ntBASIC3.37□□□□□ -1.87
RORAP35398 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.37□□□□□ -1.87
RORAP35398 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.37□□□□□ -1.87
RORAP35398 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.37□□□□□ -1.87
RORAP35398 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.37□□□□□ -1.87
RORAP35398 MTCO2P32-201ENST00000514865 403 ntBASIC3.37□□□□□ -1.87
RORAP35398 RNU6-1073P-201ENST00000517182 106 ntBASIC3.37□□□□□ -1.87
RORAP35398 RN7SKP289-201ENST00000517244 295 ntBASIC3.37□□□□□ -1.87
RORAP35398 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RORAP35398 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.37□□□□□ -1.87
RORAP35398 SERPINE4P-201ENST00000554978 281 ntBASIC3.37□□□□□ -1.87
RORAP35398 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.37□□□□□ -1.87
RORAP35398 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.37□□□□□ -1.87
RORAP35398 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.37□□□□□ -1.87
RORAP35398 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.37□□□□□ -1.87
RORAP35398 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.37□□□□□ -1.87
RORAP35398 AC006077.1-201ENST00000604746 343 ntBASIC3.37□□□□□ -1.87
RORAP35398 AL009028.1-201ENST00000604895 802 ntBASIC3.37□□□□□ -1.87
RORAP35398 AL445493.3-201ENST00000619568 477 ntBASIC3.37□□□□□ -1.87
RORAP35398 AC097460.3-201ENST00000623099 442 ntBASIC3.37□□□□□ -1.87
RORAP35398 AP003355.3-201ENST00000623465 114 ntBASIC3.37□□□□□ -1.87
RORAP35398 AC091948.2-201ENST00000636510 279 ntBASIC3.37□□□□□ -1.87
RORAP35398 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
RORAP35398 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.37□□□□□ -1.87
RORAP35398 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RORAP35398 AC092326.2-201ENST00000624772 1561 ntBASIC3.37□□□□□ -1.87
RORAP35398 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
RORAP35398 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
RORAP35398 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RORAP35398 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RORAP35398 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RORAP35398 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.36□□□□□ -1.87
RORAP35398 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RORAP35398 PABPC1P7-201ENST00000413177 1513 ntBASIC3.36□□□□□ -1.87
RORAP35398 AP001350.1-201ENST00000601906 1524 ntBASIC3.36□□□□□ -1.87
RORAP35398 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
RORAP35398 AL512646.1-201ENST00000269395 1077 ntBASIC3.36□□□□□ -1.87
RORAP35398 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
RORAP35398 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RORAP35398 RNA5SP267-201ENST00000364893 126 ntBASIC3.36□□□□□ -1.87
RORAP35398 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RORAP35398 SNORA9-201ENST00000384215 133 ntBASIC3.36□□□□□ -1.87
RORAP35398 U3.39-201ENST00000408569 239 ntBASIC3.36□□□□□ -1.87
RORAP35398 RN7SKP111-201ENST00000410349 271 ntBASIC3.36□□□□□ -1.87
RORAP35398 AC017079.2-201ENST00000416102 485 ntBASIC3.36□□□□□ -1.87
RORAP35398 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.36□□□□□ -1.87
RORAP35398 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.36□□□□□ -1.87
RORAP35398 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.36□□□□□ -1.87
RORAP35398 MOB1AP1-201ENST00000430903 535 ntBASIC3.36□□□□□ -1.87
RORAP35398 RPL21P110-201ENST00000433345 446 ntBASIC3.36□□□□□ -1.87
RORAP35398 FABP5P3-201ENST00000437960 408 ntBASIC3.36□□□□□ -1.87
RORAP35398 AC017099.1-201ENST00000448261 1028 ntBASIC3.36□□□□□ -1.87
RORAP35398 PTGES3P5-201ENST00000455109 434 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms