Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AC008121.2-201ENST00000614647 523 ntBASIC3.46□□□□□ -1.86
HOXA9P31269 AC138932.5-201ENST00000617759 563 ntBASIC3.46□□□□□ -1.86
HOXA9P31269 AC006213.5-201ENST00000619673 288 ntBASIC3.46□□□□□ -1.86
HOXA9P31269 SNORD39.4-201ENST00000620099 78 ntBASIC3.46□□□□□ -1.86
HOXA9P31269 AC026422.1-201ENST00000623961 452 ntBASIC3.46□□□□□ -1.86
HOXA9P31269 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HOXA9P31269 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.46□□□□□ -1.86
HOXA9P31269 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.46□□□□□ -1.86
HOXA9P31269 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HOXA9P31269 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HOXA9P31269 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXA9P31269 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HOXA9P31269 AL513302.2-201ENST00000562313 1842 ntBASIC3.45□□□□□ -1.86
HOXA9P31269 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.45□□□□□ -1.86
HOXA9P31269 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXA9P31269 MIR422A-201ENST00000362286 90 ntBASIC3.45□□□□□ -1.86
HOXA9P31269 RNA5SP295-201ENST00000362655 121 ntBASIC3.45□□□□□ -1.86
HOXA9P31269 RNU1-140P-201ENST00000365040 165 ntBASIC3.45□□□□□ -1.86
HOXA9P31269 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HOXA9P31269 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
HOXA9P31269 MTCO3P31-201ENST00000405526 789 ntBASIC3.45□□□□□ -1.86
HOXA9P31269 AP000567.1-201ENST00000406413 156 ntBASIC3.45□□□□□ -1.86
HOXA9P31269 RPL31P2-201ENST00000413849 377 ntBASIC3.45□□□□□ -1.86
HOXA9P31269 XKRYP4-201ENST00000414395 483 ntBASIC3.45□□□□□ -1.86
HOXA9P31269 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.45□□□□□ -1.86
HOXA9P31269 ARL2BPP3-201ENST00000421226 480 ntBASIC3.45□□□□□ -1.86
HOXA9P31269 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXA9P31269 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXA9P31269 AC023347.2-201ENST00000433994 462 ntBASIC3.45□□□□□ -1.86
HOXA9P31269 XKRYP5-201ENST00000449659 483 ntBASIC3.45□□□□□ -1.86
HOXA9P31269 AC093663.2-201ENST00000484625 313 ntBASIC3.45□□□□□ -1.86
HOXA9P31269 OR9N1P-202ENST00000494289 481 ntBASIC3.45□□□□□ -1.86
HOXA9P31269 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXA9P31269 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.45□□□□□ -1.86
HOXA9P31269 AC103833.1-201ENST00000517442 172 ntBASIC3.45□□□□□ -1.86
HOXA9P31269 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXA9P31269 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXA9P31269 HAUS1P3-201ENST00000523909 662 ntBASIC3.45□□□□□ -1.86
HOXA9P31269 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.45□□□□□ -1.86
HOXA9P31269 AL121594.4-201ENST00000556211 1196 ntBASIC3.45□□□□□ -1.86
HOXA9P31269 MIR4425-201ENST00000580572 84 ntBASIC3.45□□□□□ -1.86
HOXA9P31269 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXA9P31269 AC115085.1-201ENST00000588924 229 ntBASIC3.45□□□□□ -1.86
HOXA9P31269 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXA9P31269 AC006539.2-201ENST00000601729 572 ntBASIC3.45□□□□□ -1.86
HOXA9P31269 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXA9P31269 AL162713.1-201ENST00000604480 262 ntBASIC3.45□□□□□ -1.86
HOXA9P31269 AL137843.1-201ENST00000605078 385 ntBASIC3.45□□□□□ -1.86
HOXA9P31269 AC135178.6-201ENST00000605314 398 ntBASIC3.45□□□□□ -1.86
HOXA9P31269 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXA9P31269 AL592295.2-201ENST00000612578 206 ntBASIC3.45□□□□□ -1.86
HOXA9P31269 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.45□□□□□ -1.86
HOXA9P31269 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
HOXA9P31269 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HOXA9P31269 AC021755.1-201ENST00000559747 1447 ntBASIC3.44□□□□□ -1.86
HOXA9P31269 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
HOXA9P31269 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.44□□□□□ -1.86
HOXA9P31269 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HOXA9P31269 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HOXA9P31269 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.44□□□□□ -1.86
HOXA9P31269 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HOXA9P31269 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
HOXA9P31269 AL138885.1-201ENST00000405921 675 ntBASIC3.44□□□□□ -1.86
HOXA9P31269 AC007899.1-201ENST00000412776 775 ntBASIC3.44□□□□□ -1.86
HOXA9P31269 BOLA3P4-201ENST00000418151 400 ntBASIC3.44□□□□□ -1.86
HOXA9P31269 AC012065.2-201ENST00000421295 375 ntBASIC3.44□□□□□ -1.86
HOXA9P31269 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXA9P31269 MTCO1P43-201ENST00000431831 488 ntBASIC3.44□□□□□ -1.86
HOXA9P31269 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.44□□□□□ -1.86
HOXA9P31269 AL353718.1-201ENST00000451028 517 ntBASIC3.44□□□□□ -1.86
HOXA9P31269 SLC31A1P1-201ENST00000451221 567 ntBASIC3.44□□□□□ -1.86
HOXA9P31269 RPS4XP2-201ENST00000458402 793 ntBASIC3.44□□□□□ -1.86
HOXA9P31269 RN7SL863P-201ENST00000462370 296 ntBASIC3.44□□□□□ -1.86
HOXA9P31269 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXA9P31269 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HOXA9P31269 AP000893.1-201ENST00000474462 794 ntBASIC3.44□□□□□ -1.86
HOXA9P31269 ARL2BPP6-201ENST00000512757 439 ntBASIC3.44□□□□□ -1.86
HOXA9P31269 HIGD1AP3-201ENST00000515857 278 ntBASIC3.44□□□□□ -1.86
HOXA9P31269 RN7SKP116-201ENST00000516902 319 ntBASIC3.44□□□□□ -1.86
HOXA9P31269 MTND2P7-201ENST00000521337 640 ntBASIC3.44□□□□□ -1.86
HOXA9P31269 AC113192.3-201ENST00000529152 742 ntBASIC3.44□□□□□ -1.86
HOXA9P31269 AC006518.1-201ENST00000541449 943 ntBASIC3.44□□□□□ -1.86
HOXA9P31269 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXA9P31269 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HOXA9P31269 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.44□□□□□ -1.86
HOXA9P31269 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXA9P31269 AC015917.1-201ENST00000579654 510 ntBASIC3.44□□□□□ -1.86
HOXA9P31269 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXA9P31269 AC092474.3-201ENST00000603022 568 ntBASIC3.44□□□□□ -1.86
HOXA9P31269 BNIP3P11-201ENST00000603878 563 ntBASIC3.44□□□□□ -1.86
HOXA9P31269 AC069304.3-201ENST00000603938 1084 ntBASIC3.44□□□□□ -1.86
HOXA9P31269 AC093732.2-201ENST00000607950 274 ntBASIC3.44□□□□□ -1.86
HOXA9P31269 MIR7973-1-201ENST00000614683 76 ntBASIC3.44□□□□□ -1.86
HOXA9P31269 AC011472.4-201ENST00000615848 491 ntBASIC3.44□□□□□ -1.86
HOXA9P31269 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.44□□□□□ -1.86
HOXA9P31269 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.44□□□□□ -1.86
HOXA9P31269 PLCE1P1-201ENST00000622094 305 ntBASIC3.44□□□□□ -1.86
HOXA9P31269 AC110801.1-201ENST00000623590 212 ntBASIC3.44□□□□□ -1.86
HOXA9P31269 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
HOXA9P31269 OR5BR1P-201ENST00000524992 1330 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms