Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC2.82□□□□□ -1.96
COL5A1P20908 AC006960.1-201ENST00000419980 153 ntBASIC2.82□□□□□ -1.96
COL5A1P20908 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.82□□□□□ -1.96
COL5A1P20908 RPL21P40-201ENST00000428586 483 ntBASIC2.82□□□□□ -1.96
COL5A1P20908 RPS6P12-201ENST00000432491 726 ntBASIC2.82□□□□□ -1.96
COL5A1P20908 AC146507.2-201ENST00000460608 476 ntBASIC2.82□□□□□ -1.96
COL5A1P20908 ANXA2P1-201ENST00000505539 926 ntBASIC2.82□□□□□ -1.96
COL5A1P20908 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.82□□□□□ -1.96
COL5A1P20908 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.82□□□□□ -1.96
COL5A1P20908 CYCSP39-201ENST00000565821 309 ntBASIC2.82□□□□□ -1.96
COL5A1P20908 AC234778.2-201ENST00000566241 354 ntBASIC2.82□□□□□ -1.96
COL5A1P20908 AC138761.3-201ENST00000579993 334 ntBASIC2.82□□□□□ -1.96
COL5A1P20908 AC098826.3-201ENST00000603823 466 ntBASIC2.82□□□□□ -1.96
COL5A1P20908 BNIP3P7-201ENST00000605641 516 ntBASIC2.82□□□□□ -1.96
COL5A1P20908 MIR7111-201ENST00000619751 72 ntBASIC2.82□□□□□ -1.96
COL5A1P20908 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.82□□□□□ -1.96
COL5A1P20908 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.82□□□□□ -1.96
COL5A1P20908 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC2.82□□□□□ -1.96
COL5A1P20908 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
COL5A1P20908 AC095050.2-201ENST00000510748 1458 ntBASIC2.82□□□□□ -1.96
COL5A1P20908 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC2.82□□□□□ -1.96
COL5A1P20908 AL049555.1-201ENST00000562834 1933 ntBASIC2.82□□□□□ -1.96
COL5A1P20908 PWAR6-201ENST00000552334 4618 ntBASIC2.82□□□□□ -1.96
COL5A1P20908 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
COL5A1P20908 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
COL5A1P20908 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
COL5A1P20908 MIR34A-201ENST00000385130 110 ntBASIC2.82□□□□□ -1.96
COL5A1P20908 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
COL5A1P20908 MIR764-201ENST00000390811 85 ntBASIC2.82□□□□□ -1.96
COL5A1P20908 AC110754.1-201ENST00000399740 601 ntBASIC2.82□□□□□ -1.96
COL5A1P20908 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.82□□□□□ -1.96
COL5A1P20908 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.82□□□□□ -1.96
COL5A1P20908 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.82□□□□□ -1.96
COL5A1P20908 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.82□□□□□ -1.96
COL5A1P20908 SNORD109B-201ENST00000458961 67 ntBASIC2.82□□□□□ -1.96
COL5A1P20908 SNORD109A-201ENST00000459128 67 ntBASIC2.82□□□□□ -1.96
COL5A1P20908 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC2.82□□□□□ -1.96
COL5A1P20908 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC2.82□□□□□ -1.96
COL5A1P20908 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.82□□□□□ -1.96
COL5A1P20908 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
COL5A1P20908 AC015849.6-201ENST00000605454 474 ntBASIC2.82□□□□□ -1.96
COL5A1P20908 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC2.82□□□□□ -1.96
COL5A1P20908 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC2.82□□□□□ -1.96
COL5A1P20908 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
COL5A1P20908 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
COL5A1P20908 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.82□□□□□ -1.96
COL5A1P20908 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.82□□□□□ -1.96
COL5A1P20908 AL592494.2-201ENST00000425455 1548 ntBASIC2.82□□□□□ -1.96
COL5A1P20908 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
COL5A1P20908 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
COL5A1P20908 TMEM161BP1-201ENST00000457388 1457 ntBASIC2.81□□□□□ -1.96
COL5A1P20908 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
COL5A1P20908 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
COL5A1P20908 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.81□□□□□ -1.96
COL5A1P20908 RNA5SP21-201ENST00000410917 96 ntBASIC2.81□□□□□ -1.96
COL5A1P20908 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.81□□□□□ -1.96
COL5A1P20908 AC007563.3-201ENST00000433233 371 ntBASIC2.81□□□□□ -1.96
COL5A1P20908 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC2.81□□□□□ -1.96
COL5A1P20908 AC104058.1-201ENST00000448028 297 ntBASIC2.81□□□□□ -1.96
COL5A1P20908 AC125238.1-201ENST00000448842 249 ntBASIC2.81□□□□□ -1.96
COL5A1P20908 ST13P14-201ENST00000474095 734 ntBASIC2.81□□□□□ -1.96
COL5A1P20908 AC104687.1-201ENST00000485829 412 ntBASIC2.81□□□□□ -1.96
COL5A1P20908 RN7SL20P-201ENST00000488827 297 ntBASIC2.81□□□□□ -1.96
COL5A1P20908 AC113398.2-201ENST00000507630 558 ntBASIC2.81□□□□□ -1.96
COL5A1P20908 AC111000.2-201ENST00000507775 550 ntBASIC2.81□□□□□ -1.96
COL5A1P20908 RN7SKP43-201ENST00000516173 320 ntBASIC2.81□□□□□ -1.96
COL5A1P20908 RN7SKP60-201ENST00000516985 239 ntBASIC2.81□□□□□ -1.96
COL5A1P20908 RNU6-1231P-201ENST00000517185 103 ntBASIC2.81□□□□□ -1.96
COL5A1P20908 AC245166.1-201ENST00000521012 253 ntBASIC2.81□□□□□ -1.96
COL5A1P20908 EEF1A1P37-201ENST00000522748 715 ntBASIC2.81□□□□□ -1.96
COL5A1P20908 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.81□□□□□ -1.96
COL5A1P20908 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC2.81□□□□□ -1.96
COL5A1P20908 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.81□□□□□ -1.96
COL5A1P20908 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.81□□□□□ -1.96
COL5A1P20908 AC007620.3-201ENST00000608131 497 ntBASIC2.81□□□□□ -1.96
COL5A1P20908 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.81□□□□□ -1.96
COL5A1P20908 AC093909.5-201ENST00000621839 1799 ntBASIC2.81□□□□□ -1.96
COL5A1P20908 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
COL5A1P20908 FAM133CP-201ENST00000332869 704 ntBASIC2.8□□□□□ -1.96
COL5A1P20908 U3.6-201ENST00000363622 211 ntBASIC2.8□□□□□ -1.96
COL5A1P20908 RAP1BP1-201ENST00000412709 553 ntBASIC2.8□□□□□ -1.96
COL5A1P20908 OR2AS1P-201ENST00000427827 319 ntBASIC2.8□□□□□ -1.96
COL5A1P20908 AC005189.1-201ENST00000431286 310 ntBASIC2.8□□□□□ -1.96
COL5A1P20908 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC2.8□□□□□ -1.96
COL5A1P20908 MTND3P4-201ENST00000453537 303 ntBASIC2.8□□□□□ -1.96
COL5A1P20908 RN7SL442P-201ENST00000473804 320 ntBASIC2.8□□□□□ -1.96
COL5A1P20908 MTHFD2P4-201ENST00000515074 1025 ntBASIC2.8□□□□□ -1.96
COL5A1P20908 HMGB3P26-201ENST00000560051 582 ntBASIC2.8□□□□□ -1.96
COL5A1P20908 AGGF1P8-201ENST00000562979 1000 ntBASIC2.8□□□□□ -1.96
COL5A1P20908 AC106734.1-201ENST00000568646 663 ntBASIC2.8□□□□□ -1.96
COL5A1P20908 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.8□□□□□ -1.96
COL5A1P20908 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.8□□□□□ -1.96
COL5A1P20908 BMS1P7-201ENST00000602440 1052 ntBASIC2.8□□□□□ -1.96
COL5A1P20908 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC2.8□□□□□ -1.96
COL5A1P20908 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
COL5A1P20908 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC2.8□□□□□ -1.96
COL5A1P20908 AC004972.1-201ENST00000623934 2209 ntBASIC2.8□□□□□ -1.96
COL5A1P20908 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
COL5A1P20908 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
COL5A1P20908 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms