Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LIG1P18858 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LIG1P18858 ZBTB8OSP1-201ENST00000342688 498 ntBASIC5.97□□□□□ -1.45
LIG1P18858 Y_RNA.58-201ENST00000362807 102 ntBASIC5.97□□□□□ -1.45
LIG1P18858 Y_RNA.154-201ENST00000363624 102 ntBASIC5.97□□□□□ -1.45
LIG1P18858 RNU6-289P-201ENST00000364093 107 ntBASIC5.97□□□□□ -1.45
LIG1P18858 RNY3P1-201ENST00000365085 102 ntBASIC5.97□□□□□ -1.45
LIG1P18858 RNY3-201ENST00000365484 102 ntBASIC5.97□□□□□ -1.45
LIG1P18858 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.97□□□□□ -1.45
LIG1P18858 Y_RNA.490-201ENST00000384413 102 ntBASIC5.97□□□□□ -1.45
LIG1P18858 MIR92A2-201ENST00000385299 75 ntBASIC5.97□□□□□ -1.45
LIG1P18858 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.97□□□□□ -1.45
LIG1P18858 RNU6-373P-201ENST00000411247 98 ntBASIC5.97□□□□□ -1.45
LIG1P18858 AP000534.2-201ENST00000412729 568 ntBASIC5.97□□□□□ -1.45
LIG1P18858 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.97□□□□□ -1.45
LIG1P18858 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.97□□□□□ -1.45
LIG1P18858 AC104837.2-201ENST00000427236 424 ntBASIC5.97□□□□□ -1.45
LIG1P18858 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.97□□□□□ -1.45
LIG1P18858 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC5.97□□□□□ -1.45
LIG1P18858 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.97□□□□□ -1.45
LIG1P18858 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.97□□□□□ -1.45
LIG1P18858 AC011225.1-201ENST00000457751 369 ntBASIC5.97□□□□□ -1.45
LIG1P18858 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.97□□□□□ -1.45
LIG1P18858 AC007537.2-201ENST00000472093 511 ntBASIC5.97□□□□□ -1.45
LIG1P18858 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.97□□□□□ -1.45
LIG1P18858 RPL7P39-201ENST00000481157 744 ntBASIC5.97□□□□□ -1.45
LIG1P18858 RN7SL346P-201ENST00000491561 294 ntBASIC5.97□□□□□ -1.45
LIG1P18858 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.97□□□□□ -1.45
LIG1P18858 RNU6-327P-201ENST00000516270 127 ntBASIC5.97□□□□□ -1.45
LIG1P18858 RNU6-835P-201ENST00000516974 104 ntBASIC5.97□□□□□ -1.45
LIG1P18858 RNA5SP373-201ENST00000517271 95 ntBASIC5.97□□□□□ -1.45
LIG1P18858 AC105029.1-201ENST00000520250 669 ntBASIC5.97□□□□□ -1.45
LIG1P18858 HMGB1P40-201ENST00000525121 540 ntBASIC5.97□□□□□ -1.45
LIG1P18858 AC243972.3-201ENST00000539655 198 ntBASIC5.97□□□□□ -1.45
LIG1P18858 PDCD5P1-201ENST00000543528 309 ntBASIC5.97□□□□□ -1.45
LIG1P18858 AL109766.1-201ENST00000555080 552 ntBASIC5.97□□□□□ -1.45
LIG1P18858 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.97□□□□□ -1.45
LIG1P18858 RN7SL708P-201ENST00000580952 299 ntBASIC5.97□□□□□ -1.45
LIG1P18858 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.97□□□□□ -1.45
LIG1P18858 KC877982.1-201ENST00000602313 470 ntBASIC5.97□□□□□ -1.45
LIG1P18858 AC008814.1-201ENST00000603797 406 ntBASIC5.97□□□□□ -1.45
LIG1P18858 AL360085.1-201ENST00000604713 532 ntBASIC5.97□□□□□ -1.45
LIG1P18858 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC5.97□□□□□ -1.45
LIG1P18858 MIR6837-201ENST00000620884 64 ntBASIC5.97□□□□□ -1.45
LIG1P18858 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
LIG1P18858 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.97□□□□□ -1.45
LIG1P18858 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
LIG1P18858 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
LIG1P18858 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
LIG1P18858 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
LIG1P18858 AC083843.3-201ENST00000623679 2186 ntBASIC5.97□□□□□ -1.45
LIG1P18858 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.97□□□□□ -1.45
LIG1P18858 AC097504.1-201ENST00000515103 2415 ntBASIC5.97□□□□□ -1.45
LIG1P18858 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
LIG1P18858 AL672167.1-204ENST00000641875 3017 ntBASIC5.96□□□□□ -1.45
LIG1P18858 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
LIG1P18858 ERCC6-202ENST00000374127 1782 ntBASIC5.96□□□□□ -1.46
LIG1P18858 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
LIG1P18858 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.46
LIG1P18858 Y_RNA.419-201ENST00000384041 102 ntBASIC5.96□□□□□ -1.46
LIG1P18858 RPS4XP8-201ENST00000402039 771 ntBASIC5.96□□□□□ -1.46
LIG1P18858 MIR1178-201ENST00000408396 91 ntBASIC5.96□□□□□ -1.46
LIG1P18858 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC5.96□□□□□ -1.46
LIG1P18858 SNRPFP1-201ENST00000414761 252 ntBASIC5.96□□□□□ -1.46
LIG1P18858 AC104333.2-201ENST00000422630 192 ntBASIC5.96□□□□□ -1.46
LIG1P18858 OR4F13P-201ENST00000428478 931 ntBASIC5.96□□□□□ -1.46
LIG1P18858 AL365400.1-201ENST00000431854 640 ntBASIC5.96□□□□□ -1.46
LIG1P18858 RPS3AP54-201ENST00000435535 734 ntBASIC5.96□□□□□ -1.46
LIG1P18858 CBX1P4-201ENST00000439415 457 ntBASIC5.96□□□□□ -1.46
LIG1P18858 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC5.96□□□□□ -1.46
LIG1P18858 AC012512.1-201ENST00000446594 718 ntBASIC5.96□□□□□ -1.46
LIG1P18858 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC5.96□□□□□ -1.46
LIG1P18858 BX842559.2-201ENST00000451418 605 ntBASIC5.96□□□□□ -1.46
LIG1P18858 AL513533.1-201ENST00000453728 415 ntBASIC5.96□□□□□ -1.46
LIG1P18858 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LIG1P18858 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC5.96□□□□□ -1.46
LIG1P18858 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.96□□□□□ -1.46
LIG1P18858 AC034159.1-201ENST00000513885 583 ntBASIC5.96□□□□□ -1.46
LIG1P18858 SNORA19.2-201ENST00000516013 114 ntBASIC5.96□□□□□ -1.46
LIG1P18858 RNU6-201P-201ENST00000517100 61 ntBASIC5.96□□□□□ -1.46
LIG1P18858 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.96□□□□□ -1.46
LIG1P18858 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.96□□□□□ -1.46
LIG1P18858 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC5.96□□□□□ -1.46
LIG1P18858 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
LIG1P18858 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.96□□□□□ -1.46
LIG1P18858 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC5.96□□□□□ -1.46
LIG1P18858 NACA-211ENST00000548563 827 ntTSL 5 BASIC5.96□□□□□ -1.46
LIG1P18858 AC006349.1-201ENST00000555526 235 ntBASIC5.96□□□□□ -1.46
LIG1P18858 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.96□□□□□ -1.46
LIG1P18858 AC005341.1-201ENST00000571086 708 ntBASIC5.96□□□□□ -1.46
LIG1P18858 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.96□□□□□ -1.46
LIG1P18858 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.96□□□□□ -1.46
LIG1P18858 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.96□□□□□ -1.46
LIG1P18858 IMMP1LP3-201ENST00000604197 224 ntBASIC5.96□□□□□ -1.46
LIG1P18858 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.96□□□□□ -1.46
LIG1P18858 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC5.96□□□□□ -1.46
LIG1P18858 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.96□□□□□ -1.46
LIG1P18858 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
LIG1P18858 AC015871.5-202ENST00000623252 701 ntBASIC5.96□□□□□ -1.46
LIG1P18858 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms