Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NCK1P16333 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NCK1P16333 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
NCK1P16333 SPRR2C-201ENST00000290702 219 ntBASIC3.29□□□□□ -1.88
NCK1P16333 RNU6-115P-201ENST00000364310 107 ntBASIC3.29□□□□□ -1.88
NCK1P16333 AP000567.1-201ENST00000406413 156 ntBASIC3.29□□□□□ -1.88
NCK1P16333 RNA5SP31-201ENST00000411144 127 ntBASIC3.29□□□□□ -1.88
NCK1P16333 RNA5SP107-201ENST00000411358 122 ntBASIC3.29□□□□□ -1.88
NCK1P16333 DBIP2-201ENST00000419076 262 ntBASIC3.29□□□□□ -1.88
NCK1P16333 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.29□□□□□ -1.88
NCK1P16333 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.29□□□□□ -1.88
NCK1P16333 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.29□□□□□ -1.88
NCK1P16333 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.29□□□□□ -1.88
NCK1P16333 AL096829.2-201ENST00000446582 742 ntBASIC3.29□□□□□ -1.88
NCK1P16333 GXYLT1P1-201ENST00000446657 490 ntBASIC3.29□□□□□ -1.88
NCK1P16333 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.29□□□□□ -1.88
NCK1P16333 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.29□□□□□ -1.88
NCK1P16333 HMGN1P18-201ENST00000457642 277 ntBASIC3.29□□□□□ -1.88
NCK1P16333 RNU7-140P-201ENST00000459546 60 ntBASIC3.29□□□□□ -1.88
NCK1P16333 RN7SL594P-201ENST00000470590 287 ntBASIC3.29□□□□□ -1.88
NCK1P16333 RPS17P11-201ENST00000474297 293 ntBASIC3.29□□□□□ -1.88
NCK1P16333 AC021146.5-201ENST00000503544 545 ntBASIC3.29□□□□□ -1.88
NCK1P16333 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NCK1P16333 MTCO3P44-201ENST00000510977 541 ntBASIC3.29□□□□□ -1.88
NCK1P16333 AC093853.1-201ENST00000515689 483 ntBASIC3.29□□□□□ -1.88
NCK1P16333 SNORA70.18-201ENST00000516696 98 ntBASIC3.29□□□□□ -1.88
NCK1P16333 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.29□□□□□ -1.88
NCK1P16333 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.29□□□□□ -1.88
NCK1P16333 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NCK1P16333 AP000926.4-201ENST00000527351 454 ntBASIC3.29□□□□□ -1.88
NCK1P16333 MTND5P21-201ENST00000531961 522 ntBASIC3.29□□□□□ -1.88
NCK1P16333 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.29□□□□□ -1.88
NCK1P16333 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NCK1P16333 NIFKP8-201ENST00000560500 874 ntBASIC3.29□□□□□ -1.88
NCK1P16333 AC010735.1-201ENST00000567305 1026 ntBASIC3.29□□□□□ -1.88
NCK1P16333 AGGF1P6-201ENST00000569213 976 ntBASIC3.29□□□□□ -1.88
NCK1P16333 MIR4789-201ENST00000577469 82 ntBASIC3.29□□□□□ -1.88
NCK1P16333 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
NCK1P16333 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NCK1P16333 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NCK1P16333 U4.6-201ENST00000621618 127 ntBASIC3.29□□□□□ -1.88
NCK1P16333 MIR6810-201ENST00000622701 70 ntBASIC3.29□□□□□ -1.88
NCK1P16333 AC068880.4-201ENST00000623082 495 ntBASIC3.29□□□□□ -1.88
NCK1P16333 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.29□□□□□ -1.88
NCK1P16333 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.29□□□□□ -1.88
NCK1P16333 MIR7153-201ENST00000637758 57 ntBASIC3.29□□□□□ -1.88
NCK1P16333 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
NCK1P16333 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.29□□□□□ -1.88
NCK1P16333 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
NCK1P16333 AP004289.2-201ENST00000444413 1457 ntBASIC3.28□□□□□ -1.88
NCK1P16333 AC004925.1-201ENST00000624256 2706 ntBASIC3.28□□□□□ -1.88
NCK1P16333 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.28□□□□□ -1.88
NCK1P16333 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
NCK1P16333 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NCK1P16333 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NCK1P16333 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NCK1P16333 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NCK1P16333 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
NCK1P16333 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.28□□□□□ -1.88
NCK1P16333 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NCK1P16333 FRG1CP-201ENST00000358464 769 ntBASIC3.28□□□□□ -1.88
NCK1P16333 RNA5SP295-201ENST00000362655 121 ntBASIC3.28□□□□□ -1.88
NCK1P16333 RNU6-251P-201ENST00000363235 104 ntBASIC3.28□□□□□ -1.88
NCK1P16333 RNU6-353P-201ENST00000364266 108 ntBASIC3.28□□□□□ -1.88
NCK1P16333 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.28□□□□□ -1.88
NCK1P16333 RNU6-629P-201ENST00000384061 103 ntBASIC3.28□□□□□ -1.88
NCK1P16333 RNU6-761P-201ENST00000384148 107 ntBASIC3.28□□□□□ -1.88
NCK1P16333 MTND4LP20-201ENST00000402379 270 ntBASIC3.28□□□□□ -1.88
NCK1P16333 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.28□□□□□ -1.88
NCK1P16333 USP9YP19-201ENST00000412165 485 ntBASIC3.28□□□□□ -1.88
NCK1P16333 AC009237.5-201ENST00000414271 501 ntBASIC3.28□□□□□ -1.88
NCK1P16333 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.28□□□□□ -1.88
NCK1P16333 RPL21P66-201ENST00000426566 466 ntBASIC3.28□□□□□ -1.88
NCK1P16333 RPL23AP82-202ENST00000427528 469 ntBASIC3.28□□□□□ -1.88
NCK1P16333 AP000907.1-201ENST00000428428 510 ntBASIC3.28□□□□□ -1.88
NCK1P16333 SETP5-201ENST00000437270 562 ntBASIC3.28□□□□□ -1.88
NCK1P16333 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.28□□□□□ -1.88
NCK1P16333 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.28□□□□□ -1.88
NCK1P16333 RPL23AP16-201ENST00000441715 421 ntBASIC3.28□□□□□ -1.88
NCK1P16333 RPL7P59-201ENST00000447700 943 ntBASIC3.28□□□□□ -1.88
NCK1P16333 RPL7P52-201ENST00000449200 742 ntBASIC3.28□□□□□ -1.88
NCK1P16333 CENPBD1P1-201ENST00000464061 469 ntBASIC3.28□□□□□ -1.88
NCK1P16333 AC021205.2-201ENST00000480069 347 ntBASIC3.28□□□□□ -1.88
NCK1P16333 AC048346.1-201ENST00000510247 144 ntBASIC3.28□□□□□ -1.88
NCK1P16333 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.28□□□□□ -1.88
NCK1P16333 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NCK1P16333 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.28□□□□□ -1.88
NCK1P16333 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
NCK1P16333 AC007991.1-201ENST00000522680 631 ntBASIC3.28□□□□□ -1.88
NCK1P16333 ZNF705CP-201ENST00000530515 889 ntBASIC3.28□□□□□ -1.88
NCK1P16333 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.28□□□□□ -1.88
NCK1P16333 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.28□□□□□ -1.88
NCK1P16333 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.28□□□□□ -1.88
NCK1P16333 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.28□□□□□ -1.88
NCK1P16333 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.28□□□□□ -1.88
NCK1P16333 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.28□□□□□ -1.88
NCK1P16333 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.28□□□□□ -1.88
NCK1P16333 PARP1P2-201ENST00000556806 195 ntBASIC3.28□□□□□ -1.88
NCK1P16333 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.28□□□□□ -1.88
NCK1P16333 MTND4LP25-201ENST00000570218 163 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms