Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.21□□□□□ -1.58
SNRPA1P09661 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.21□□□□□ -1.58
SNRPA1P09661 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.21□□□□□ -1.58
SNRPA1P09661 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.21□□□□□ -1.58
SNRPA1P09661 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.21□□□□□ -1.58
SNRPA1P09661 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC5.21□□□□□ -1.58
SNRPA1P09661 RPL23AP87-202ENST00000573039 466 ntBASIC5.21□□□□□ -1.58
SNRPA1P09661 AC107982.3-201ENST00000584957 985 ntBASIC5.21□□□□□ -1.58
SNRPA1P09661 AC079089.3-201ENST00000603094 673 ntBASIC5.21□□□□□ -1.58
SNRPA1P09661 DLEU2_1.1-201ENST00000612089 120 ntBASIC5.21□□□□□ -1.58
SNRPA1P09661 DLEU2_1.2-201ENST00000614667 120 ntBASIC5.21□□□□□ -1.58
SNRPA1P09661 AC018926.3-201ENST00000618841 406 ntBASIC5.21□□□□□ -1.58
SNRPA1P09661 AC039056.2-201ENST00000622261 511 ntBASIC5.21□□□□□ -1.58
SNRPA1P09661 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SNRPA1P09661 AP005264.7-201ENST00000625003 745 ntBASIC5.21□□□□□ -1.58
SNRPA1P09661 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.21□□□□□ -1.58
SNRPA1P09661 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
SNRPA1P09661 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.21□□□□□ -1.58
SNRPA1P09661 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.21□□□□□ -1.58
SNRPA1P09661 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SNRPA1P09661 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SNRPA1P09661 DDX18P4-201ENST00000511690 1966 ntBASIC5.2□□□□□ -1.58
SNRPA1P09661 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
SNRPA1P09661 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SNRPA1P09661 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SNRPA1P09661 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SNRPA1P09661 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC5.2□□□□□ -1.58
SNRPA1P09661 RNU6-1119P-201ENST00000384349 108 ntBASIC5.2□□□□□ -1.58
SNRPA1P09661 ATP5F1P4-201ENST00000397288 746 ntBASIC5.2□□□□□ -1.58
SNRPA1P09661 CYCSP45-201ENST00000402289 315 ntBASIC5.2□□□□□ -1.58
SNRPA1P09661 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.2□□□□□ -1.58
SNRPA1P09661 AL450992.3-201ENST00000413192 568 ntBASIC5.2□□□□□ -1.58
SNRPA1P09661 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.2□□□□□ -1.58
SNRPA1P09661 RPS23P10-201ENST00000416185 486 ntBASIC5.2□□□□□ -1.58
SNRPA1P09661 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC5.2□□□□□ -1.58
SNRPA1P09661 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.2□□□□□ -1.58
SNRPA1P09661 TRIM60P18-201ENST00000441518 828 ntBASIC5.2□□□□□ -1.58
SNRPA1P09661 USP9YP29-201ENST00000445112 563 ntBASIC5.2□□□□□ -1.58
SNRPA1P09661 RPL7P59-201ENST00000447700 943 ntBASIC5.2□□□□□ -1.58
SNRPA1P09661 AL034418.1-201ENST00000448675 860 ntBASIC5.2□□□□□ -1.58
SNRPA1P09661 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC5.2□□□□□ -1.58
SNRPA1P09661 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.2□□□□□ -1.58
SNRPA1P09661 RAD23BP3-201ENST00000454157 1152 ntBASIC5.2□□□□□ -1.58
SNRPA1P09661 SNRPGP9-201ENST00000456025 225 ntBASIC5.2□□□□□ -1.58
SNRPA1P09661 RNA5SP103-201ENST00000459503 118 ntBASIC5.2□□□□□ -1.58
SNRPA1P09661 AC011825.1-201ENST00000484967 388 ntBASIC5.2□□□□□ -1.58
SNRPA1P09661 RPS27P23-201ENST00000487608 251 ntBASIC5.2□□□□□ -1.58
SNRPA1P09661 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.2□□□□□ -1.58
SNRPA1P09661 AC008694.2-201ENST00000517591 306 ntBASIC5.2□□□□□ -1.58
SNRPA1P09661 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.2□□□□□ -1.58
SNRPA1P09661 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC5.2□□□□□ -1.58
SNRPA1P09661 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.2□□□□□ -1.58
SNRPA1P09661 AC134698.4-201ENST00000523451 826 ntBASIC5.2□□□□□ -1.58
SNRPA1P09661 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.2□□□□□ -1.58
SNRPA1P09661 OR7K1P-201ENST00000546439 926 ntBASIC5.2□□□□□ -1.58
SNRPA1P09661 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC5.2□□□□□ -1.58
SNRPA1P09661 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.2□□□□□ -1.58
SNRPA1P09661 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.2□□□□□ -1.58
SNRPA1P09661 AC090751.1-201ENST00000566966 267 ntBASIC5.2□□□□□ -1.58
SNRPA1P09661 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.2□□□□□ -1.58
SNRPA1P09661 AC074051.3-201ENST00000570238 358 ntBASIC5.2□□□□□ -1.58
SNRPA1P09661 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC5.2□□□□□ -1.58
SNRPA1P09661 AC012417.1-201ENST00000582307 1039 ntBASIC5.2□□□□□ -1.58
SNRPA1P09661 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.2□□□□□ -1.58
SNRPA1P09661 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.2□□□□□ -1.58
SNRPA1P09661 AP003465.2-201ENST00000602571 373 ntBASIC5.2□□□□□ -1.58
SNRPA1P09661 AL136363.2-201ENST00000604173 851 ntBASIC5.2□□□□□ -1.58
SNRPA1P09661 AC064801.1-201ENST00000612025 407 ntBASIC5.2□□□□□ -1.58
SNRPA1P09661 AC100793.4-201ENST00000613683 429 ntBASIC5.2□□□□□ -1.58
SNRPA1P09661 uc_338.9-201ENST00000617424 182 ntBASIC5.2□□□□□ -1.58
SNRPA1P09661 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.2□□□□□ -1.58
SNRPA1P09661 MIR7702-201ENST00000621931 59 ntBASIC5.2□□□□□ -1.58
SNRPA1P09661 AL356266.1-201ENST00000623311 483 ntBASIC5.2□□□□□ -1.58
SNRPA1P09661 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.2□□□□□ -1.58
SNRPA1P09661 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SNRPA1P09661 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SNRPA1P09661 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.2□□□□□ -1.58
SNRPA1P09661 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SNRPA1P09661 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SNRPA1P09661 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC5.2□□□□□ -1.58
SNRPA1P09661 AC046144.1-201ENST00000478559 1853 ntBASIC5.2□□□□□ -1.58
SNRPA1P09661 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.2□□□□□ -1.58
SNRPA1P09661 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SNRPA1P09661 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SNRPA1P09661 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SNRPA1P09661 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SNRPA1P09661 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC5.19□□□□□ -1.58
SNRPA1P09661 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SNRPA1P09661 ATP8A2P3-201ENST00000426792 1536 ntBASIC5.19□□□□□ -1.58
SNRPA1P09661 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.19□□□□□ -1.58
SNRPA1P09661 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
SNRPA1P09661 RNA5SP171-201ENST00000391071 115 ntBASIC5.19□□□□□ -1.58
SNRPA1P09661 PTMAP2-201ENST00000397627 327 ntBASIC5.19□□□□□ -1.58
SNRPA1P09661 AL590290.1-201ENST00000405336 380 ntBASIC5.19□□□□□ -1.58
SNRPA1P09661 AL133264.1-201ENST00000407157 562 ntBASIC5.19□□□□□ -1.58
SNRPA1P09661 VN1R8P-201ENST00000407739 893 ntBASIC5.19□□□□□ -1.58
SNRPA1P09661 RNU6ATAC-201ENST00000408749 126 ntBASIC5.19□□□□□ -1.58
SNRPA1P09661 AC068533.2-201ENST00000411872 306 ntBASIC5.19□□□□□ -1.58
SNRPA1P09661 USP9YP33-201ENST00000412220 421 ntBASIC5.19□□□□□ -1.58
SNRPA1P09661 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms