Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
CLDN9O95484 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.36□□□□□ -1.87
CLDN9O95484 AC098483.2-201ENST00000603158 454 ntBASIC3.36□□□□□ -1.87
CLDN9O95484 IGHV3-29-201ENST00000604817 344 ntBASIC3.36□□□□□ -1.87
CLDN9O95484 AL365503.1-201ENST00000605247 905 ntBASIC3.36□□□□□ -1.87
CLDN9O95484 AP004247.3-201ENST00000608682 624 ntBASIC3.36□□□□□ -1.87
CLDN9O95484 RMST_8.1-201ENST00000610287 165 ntBASIC3.36□□□□□ -1.87
CLDN9O95484 AL512506.1-201ENST00000613918 449 ntBASIC3.36□□□□□ -1.87
CLDN9O95484 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.36□□□□□ -1.87
CLDN9O95484 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLDN9O95484 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CLDN9O95484 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.36□□□□□ -1.87
CLDN9O95484 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
CLDN9O95484 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CLDN9O95484 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.35□□□□□ -1.87
CLDN9O95484 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.35□□□□□ -1.87
CLDN9O95484 AC032011.1-201ENST00000611703 1549 ntBASIC3.35□□□□□ -1.87
CLDN9O95484 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLDN9O95484 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLDN9O95484 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLDN9O95484 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CLDN9O95484 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CLDN9O95484 SNORD46.1-201ENST00000364139 104 ntBASIC3.35□□□□□ -1.87
CLDN9O95484 Y_RNA.333-201ENST00000365274 102 ntBASIC3.35□□□□□ -1.87
CLDN9O95484 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CLDN9O95484 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.35□□□□□ -1.87
CLDN9O95484 RNU6-441P-201ENST00000384545 106 ntBASIC3.35□□□□□ -1.87
CLDN9O95484 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CLDN9O95484 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.35□□□□□ -1.87
CLDN9O95484 AC017079.2-201ENST00000416102 485 ntBASIC3.35□□□□□ -1.87
CLDN9O95484 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.35□□□□□ -1.87
CLDN9O95484 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.35□□□□□ -1.87
CLDN9O95484 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.35□□□□□ -1.87
CLDN9O95484 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.35□□□□□ -1.87
CLDN9O95484 FTH1P25-201ENST00000447665 469 ntBASIC3.35□□□□□ -1.87
CLDN9O95484 U3.44-201ENST00000458938 192 ntBASIC3.35□□□□□ -1.87
CLDN9O95484 RPL32P14-201ENST00000463196 378 ntBASIC3.35□□□□□ -1.87
CLDN9O95484 RN7SL330P-201ENST00000469709 307 ntBASIC3.35□□□□□ -1.87
CLDN9O95484 PRDX3P4-201ENST00000470828 747 ntBASIC3.35□□□□□ -1.87
CLDN9O95484 SYPL1P1-201ENST00000473622 768 ntBASIC3.35□□□□□ -1.87
CLDN9O95484 ACTR3P3-201ENST00000480448 893 ntBASIC3.35□□□□□ -1.87
CLDN9O95484 HMGB1P38-201ENST00000490557 577 ntBASIC3.35□□□□□ -1.87
CLDN9O95484 DSTNP2-201ENST00000504533 515 ntBASIC3.35□□□□□ -1.87
CLDN9O95484 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CLDN9O95484 AC104057.1-201ENST00000515547 497 ntBASIC3.35□□□□□ -1.87
CLDN9O95484 AC107934.2-201ENST00000518653 310 ntBASIC3.35□□□□□ -1.87
CLDN9O95484 TRMT10BP1-201ENST00000519377 943 ntBASIC3.35□□□□□ -1.87
CLDN9O95484 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.35□□□□□ -1.87
CLDN9O95484 AP003168.1-201ENST00000530091 307 ntBASIC3.35□□□□□ -1.87
CLDN9O95484 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.35□□□□□ -1.87
CLDN9O95484 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.35□□□□□ -1.87
CLDN9O95484 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.35□□□□□ -1.87
CLDN9O95484 MIR3186-201ENST00000577404 85 ntBASIC3.35□□□□□ -1.87
CLDN9O95484 BPTFP1-201ENST00000579209 492 ntBASIC3.35□□□□□ -1.87
CLDN9O95484 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.35□□□□□ -1.87
CLDN9O95484 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.35□□□□□ -1.87
CLDN9O95484 AL020997.3-201ENST00000602843 359 ntBASIC3.35□□□□□ -1.87
CLDN9O95484 AC005156.1-201ENST00000613371 573 ntBASIC3.35□□□□□ -1.87
CLDN9O95484 AL162574.2-201ENST00000614618 657 ntBASIC3.35□□□□□ -1.87
CLDN9O95484 AC039056.2-201ENST00000622261 511 ntBASIC3.35□□□□□ -1.87
CLDN9O95484 AC092628.2-201ENST00000622492 339 ntBASIC3.35□□□□□ -1.87
CLDN9O95484 AL356094.1-201ENST00000624663 1212 ntBASIC3.35□□□□□ -1.87
CLDN9O95484 AL590396.4-201ENST00000636779 956 ntBASIC3.35□□□□□ -1.87
CLDN9O95484 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.35□□□□□ -1.87
CLDN9O95484 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
CLDN9O95484 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
CLDN9O95484 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.35□□□□□ -1.87
CLDN9O95484 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CLDN9O95484 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
CLDN9O95484 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
CLDN9O95484 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.34□□□□□ -1.87
CLDN9O95484 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
CLDN9O95484 PRO1804-201ENST00000623780 2050 ntBASIC3.34□□□□□ -1.87
CLDN9O95484 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
CLDN9O95484 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLDN9O95484 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLDN9O95484 AF127577.6-201ENST00000623352 2191 ntBASIC3.34□□□□□ -1.87
CLDN9O95484 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.34□□□□□ -1.87
CLDN9O95484 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLDN9O95484 RNU6-263P-201ENST00000363811 107 ntBASIC3.34□□□□□ -1.87
CLDN9O95484 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
CLDN9O95484 Y_RNA.493-201ENST00000384422 102 ntBASIC3.34□□□□□ -1.87
CLDN9O95484 MT-TC-201ENST00000387405 66 ntBASIC3.34□□□□□ -1.87
CLDN9O95484 PTMAP5-201ENST00000393073 333 ntBASIC3.34□□□□□ -1.87
CLDN9O95484 RSL24D1P1-201ENST00000404972 493 ntBASIC3.34□□□□□ -1.87
CLDN9O95484 HSPE1P26-201ENST00000405341 275 ntBASIC3.34□□□□□ -1.87
CLDN9O95484 AL138880.1-201ENST00000405824 642 ntBASIC3.34□□□□□ -1.87
CLDN9O95484 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.34□□□□□ -1.87
CLDN9O95484 TOMM22P1-201ENST00000418578 312 ntBASIC3.34□□□□□ -1.87
CLDN9O95484 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.34□□□□□ -1.87
CLDN9O95484 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.34□□□□□ -1.87
CLDN9O95484 AC096632.1-201ENST00000427395 310 ntBASIC3.34□□□□□ -1.87
CLDN9O95484 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.34□□□□□ -1.87
CLDN9O95484 CYCSP4-201ENST00000429682 331 ntBASIC3.34□□□□□ -1.87
CLDN9O95484 ARF4P2-201ENST00000430209 526 ntBASIC3.34□□□□□ -1.87
CLDN9O95484 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.34□□□□□ -1.87
CLDN9O95484 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.34□□□□□ -1.87
CLDN9O95484 AC097262.1-201ENST00000452559 548 ntBASIC3.34□□□□□ -1.87
CLDN9O95484 AC073387.1-201ENST00000453261 709 ntBASIC3.34□□□□□ -1.87
CLDN9O95484 NAP1L1P3-201ENST00000462291 880 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms