Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 PRELID3BP11-201ENST00000414230 479 ntBASIC3.4□□□□□ -1.87
CTDNEP1O95476 MTND4P11-201ENST00000417020 1058 ntBASIC3.4□□□□□ -1.87
CTDNEP1O95476 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CTDNEP1O95476 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.4□□□□□ -1.87
CTDNEP1O95476 SNRPGP3-201ENST00000469405 227 ntBASIC3.4□□□□□ -1.87
CTDNEP1O95476 AC025181.1-201ENST00000477507 416 ntBASIC3.4□□□□□ -1.87
CTDNEP1O95476 RPS29P2-201ENST00000479278 136 ntBASIC3.4□□□□□ -1.87
CTDNEP1O95476 RN7SL283P-201ENST00000489055 303 ntBASIC3.4□□□□□ -1.87
CTDNEP1O95476 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.4□□□□□ -1.87
CTDNEP1O95476 OR2A20P-203ENST00000498397 1268 ntBASIC3.4□□□□□ -1.87
CTDNEP1O95476 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.4□□□□□ -1.87
CTDNEP1O95476 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.4□□□□□ -1.87
CTDNEP1O95476 RNU6-889P-201ENST00000517189 103 ntBASIC3.4□□□□□ -1.87
CTDNEP1O95476 AC087272.1-201ENST00000523624 533 ntBASIC3.4□□□□□ -1.87
CTDNEP1O95476 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.4□□□□□ -1.87
CTDNEP1O95476 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.4□□□□□ -1.87
CTDNEP1O95476 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.4□□□□□ -1.87
CTDNEP1O95476 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.4□□□□□ -1.87
CTDNEP1O95476 BNIP3P11-201ENST00000603878 563 ntBASIC3.4□□□□□ -1.87
CTDNEP1O95476 AL359715.4-201ENST00000606629 1436 ntBASIC3.4□□□□□ -1.87
CTDNEP1O95476 AL442067.2-201ENST00000614033 363 ntBASIC3.4□□□□□ -1.87
CTDNEP1O95476 AL590240.3-201ENST00000621416 943 ntBASIC3.4□□□□□ -1.87
CTDNEP1O95476 AC073592.7-201ENST00000623659 507 ntBASIC3.4□□□□□ -1.87
CTDNEP1O95476 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.4□□□□□ -1.87
CTDNEP1O95476 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CTDNEP1O95476 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CTDNEP1O95476 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CTDNEP1O95476 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CTDNEP1O95476 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CTDNEP1O95476 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.39□□□□□ -1.87
CTDNEP1O95476 RNU2-37P-201ENST00000410695 177 ntBASIC3.39□□□□□ -1.87
CTDNEP1O95476 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.39□□□□□ -1.87
CTDNEP1O95476 AL451074.5-201ENST00000415894 435 ntBASIC3.39□□□□□ -1.87
CTDNEP1O95476 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.39□□□□□ -1.87
CTDNEP1O95476 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.39□□□□□ -1.87
CTDNEP1O95476 MTND4LP7-201ENST00000431728 294 ntBASIC3.39□□□□□ -1.87
CTDNEP1O95476 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
CTDNEP1O95476 AL691517.1-201ENST00000440833 1235 ntBASIC3.39□□□□□ -1.87
CTDNEP1O95476 XKRY2-201ENST00000442362 1093 ntBASIC3.39□□□□□ -1.87
CTDNEP1O95476 AL671855.1-201ENST00000446875 1203 ntBASIC3.39□□□□□ -1.87
CTDNEP1O95476 MTND5P8-201ENST00000449817 1083 ntBASIC3.39□□□□□ -1.87
CTDNEP1O95476 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.39□□□□□ -1.87
CTDNEP1O95476 RPS29P26-201ENST00000477483 171 ntBASIC3.39□□□□□ -1.87
CTDNEP1O95476 AC021087.2-201ENST00000504656 1203 ntBASIC3.39□□□□□ -1.87
CTDNEP1O95476 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.39□□□□□ -1.87
CTDNEP1O95476 OR5H4P-201ENST00000510851 923 ntBASIC3.39□□□□□ -1.87
CTDNEP1O95476 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CTDNEP1O95476 MTND5P21-201ENST00000531961 522 ntBASIC3.39□□□□□ -1.87
CTDNEP1O95476 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CTDNEP1O95476 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.39□□□□□ -1.87
CTDNEP1O95476 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.39□□□□□ -1.87
CTDNEP1O95476 AC007342.8-201ENST00000623278 678 ntBASIC3.39□□□□□ -1.87
CTDNEP1O95476 U6.98-201ENST00000637157 84 ntBASIC3.39□□□□□ -1.87
CTDNEP1O95476 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CTDNEP1O95476 AF127577.6-201ENST00000623352 2191 ntBASIC3.39□□□□□ -1.87
CTDNEP1O95476 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
CTDNEP1O95476 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.38□□□□□ -1.87
CTDNEP1O95476 AP001148.1-201ENST00000624124 2359 ntBASIC3.38□□□□□ -1.87
CTDNEP1O95476 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CTDNEP1O95476 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.38□□□□□ -1.87
CTDNEP1O95476 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.38□□□□□ -1.87
CTDNEP1O95476 SNORA48.5-201ENST00000391143 135 ntBASIC3.38□□□□□ -1.87
CTDNEP1O95476 AL357078.2-201ENST00000416486 427 ntBASIC3.38□□□□□ -1.87
CTDNEP1O95476 RPL31P45-201ENST00000419532 356 ntBASIC3.38□□□□□ -1.87
CTDNEP1O95476 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.38□□□□□ -1.87
CTDNEP1O95476 ELOCP6-201ENST00000429066 328 ntBASIC3.38□□□□□ -1.87
CTDNEP1O95476 USP9YP31-201ENST00000431405 881 ntBASIC3.38□□□□□ -1.87
CTDNEP1O95476 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
CTDNEP1O95476 MTCYBP12-201ENST00000440559 1134 ntBASIC3.38□□□□□ -1.87
CTDNEP1O95476 ELOCP12-201ENST00000458706 328 ntBASIC3.38□□□□□ -1.87
CTDNEP1O95476 AL049830.2-201ENST00000480072 201 ntBASIC3.38□□□□□ -1.87
CTDNEP1O95476 AC068724.1-201ENST00000487100 792 ntBASIC3.38□□□□□ -1.87
CTDNEP1O95476 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CTDNEP1O95476 AC021146.7-201ENST00000509604 775 ntBASIC3.38□□□□□ -1.87
CTDNEP1O95476 AC016550.3-201ENST00000515706 767 ntBASIC3.38□□□□□ -1.87
CTDNEP1O95476 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CTDNEP1O95476 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.38□□□□□ -1.87
CTDNEP1O95476 OR4U1P-201ENST00000554958 912 ntBASIC3.38□□□□□ -1.87
CTDNEP1O95476 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.38□□□□□ -1.87
CTDNEP1O95476 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.38□□□□□ -1.87
CTDNEP1O95476 MIR5047-201ENST00000579212 100 ntBASIC3.38□□□□□ -1.87
CTDNEP1O95476 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.38□□□□□ -1.87
CTDNEP1O95476 AL020991.1-201ENST00000612314 373 ntBASIC3.38□□□□□ -1.87
CTDNEP1O95476 AC022509.4-201ENST00000621404 572 ntBASIC3.38□□□□□ -1.87
CTDNEP1O95476 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.38□□□□□ -1.87
CTDNEP1O95476 ZNF826P-207ENST00000622273 1910 ntBASIC3.38□□□□□ -1.87
CTDNEP1O95476 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
CTDNEP1O95476 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CTDNEP1O95476 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CTDNEP1O95476 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.37□□□□□ -1.87
CTDNEP1O95476 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.37□□□□□ -1.87
CTDNEP1O95476 AL353743.1-202ENST00000431724 1695 ntBASIC3.37□□□□□ -1.87
CTDNEP1O95476 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CTDNEP1O95476 RNU6-883P-201ENST00000384597 107 ntBASIC3.37□□□□□ -1.87
CTDNEP1O95476 MIR181A2-201ENST00000384863 110 ntBASIC3.37□□□□□ -1.87
CTDNEP1O95476 RN7SKP58-201ENST00000411010 305 ntBASIC3.37□□□□□ -1.87
CTDNEP1O95476 ARF4P2-201ENST00000430209 526 ntBASIC3.37□□□□□ -1.87
CTDNEP1O95476 AL606490.7-201ENST00000433136 191 ntBASIC3.37□□□□□ -1.87
CTDNEP1O95476 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.37□□□□□ -1.87
CTDNEP1O95476 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms