Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 MTND1P20-201ENST00000430341 950 ntBASIC3.93□□□□□ -1.78
NKX2-2O95096 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.93□□□□□ -1.78
NKX2-2O95096 AL590103.1-201ENST00000434488 307 ntBASIC3.93□□□□□ -1.78
NKX2-2O95096 RPS3AP54-201ENST00000435535 734 ntBASIC3.93□□□□□ -1.78
NKX2-2O95096 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.93□□□□□ -1.78
NKX2-2O95096 MTND5P14-201ENST00000441481 1267 ntBASIC3.93□□□□□ -1.78
NKX2-2O95096 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.93□□□□□ -1.78
NKX2-2O95096 Z83846.1-201ENST00000446798 265 ntBASIC3.93□□□□□ -1.78
NKX2-2O95096 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.93□□□□□ -1.78
NKX2-2O95096 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.93□□□□□ -1.78
NKX2-2O95096 AC097262.1-201ENST00000452559 548 ntBASIC3.93□□□□□ -1.78
NKX2-2O95096 RPL5P30-201ENST00000465511 891 ntBASIC3.93□□□□□ -1.78
NKX2-2O95096 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
NKX2-2O95096 BET1P1-201ENST00000482276 359 ntBASIC3.93□□□□□ -1.78
NKX2-2O95096 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.93□□□□□ -1.78
NKX2-2O95096 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.93□□□□□ -1.78
NKX2-2O95096 AC005178.1-201ENST00000508392 440 ntBASIC3.93□□□□□ -1.78
NKX2-2O95096 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.93□□□□□ -1.78
NKX2-2O95096 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.93□□□□□ -1.78
NKX2-2O95096 AC010486.3-201ENST00000511602 785 ntBASIC3.93□□□□□ -1.78
NKX2-2O95096 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.93□□□□□ -1.78
NKX2-2O95096 AC093853.1-201ENST00000515689 483 ntBASIC3.93□□□□□ -1.78
NKX2-2O95096 RNA5SP49-201ENST00000516450 115 ntBASIC3.93□□□□□ -1.78
NKX2-2O95096 COX6CP8-201ENST00000522620 226 ntBASIC3.93□□□□□ -1.78
NKX2-2O95096 MTCO1P47-201ENST00000523889 1271 ntBASIC3.93□□□□□ -1.78
NKX2-2O95096 AC087276.1-201ENST00000529659 480 ntBASIC3.93□□□□□ -1.78
NKX2-2O95096 AL139174.1-201ENST00000531489 886 ntBASIC3.93□□□□□ -1.78
NKX2-2O95096 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NKX2-2O95096 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.93□□□□□ -1.78
NKX2-2O95096 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.93□□□□□ -1.78
NKX2-2O95096 AC007954.1-201ENST00000554198 494 ntBASIC3.93□□□□□ -1.78
NKX2-2O95096 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.93□□□□□ -1.78
NKX2-2O95096 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.93□□□□□ -1.78
NKX2-2O95096 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.93□□□□□ -1.78
NKX2-2O95096 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.93□□□□□ -1.78
NKX2-2O95096 AC053481.3-201ENST00000577881 843 ntBASIC3.93□□□□□ -1.78
NKX2-2O95096 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NKX2-2O95096 AL109653.1-201ENST00000603091 248 ntBASIC3.93□□□□□ -1.78
NKX2-2O95096 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.93□□□□□ -1.78
NKX2-2O95096 AL353600.1-201ENST00000608148 251 ntBASIC3.93□□□□□ -1.78
NKX2-2O95096 AC006329.2-201ENST00000611491 394 ntBASIC3.93□□□□□ -1.78
NKX2-2O95096 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NKX2-2O95096 AC122133.1-201ENST00000613964 233 ntBASIC3.93□□□□□ -1.78
NKX2-2O95096 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.93□□□□□ -1.78
NKX2-2O95096 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
NKX2-2O95096 PCMTD1P7-201ENST00000634506 357 ntBASIC3.93□□□□□ -1.78
NKX2-2O95096 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.93□□□□□ -1.78
NKX2-2O95096 AC099063.3-201ENST00000642066 185 ntBASIC3.93□□□□□ -1.78
NKX2-2O95096 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NKX2-2O95096 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NKX2-2O95096 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NKX2-2O95096 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.93□□□□□ -1.78
NKX2-2O95096 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.92□□□□□ -1.78
NKX2-2O95096 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NKX2-2O95096 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
NKX2-2O95096 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NKX2-2O95096 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NKX2-2O95096 RNU1-132P-201ENST00000364300 164 ntBASIC3.92□□□□□ -1.78
NKX2-2O95096 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NKX2-2O95096 RNU6-723P-201ENST00000383973 107 ntBASIC3.92□□□□□ -1.78
NKX2-2O95096 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
NKX2-2O95096 AC011933.1-201ENST00000413334 321 ntBASIC3.92□□□□□ -1.78
NKX2-2O95096 AC009480.2-201ENST00000422916 432 ntBASIC3.92□□□□□ -1.78
NKX2-2O95096 AL590233.1-201ENST00000430017 456 ntBASIC3.92□□□□□ -1.78
NKX2-2O95096 MRPS18BP2-201ENST00000434310 759 ntBASIC3.92□□□□□ -1.78
NKX2-2O95096 RPL23AP89-201ENST00000439324 255 ntBASIC3.92□□□□□ -1.78
NKX2-2O95096 ARPC3P2-201ENST00000457786 533 ntBASIC3.92□□□□□ -1.78
NKX2-2O95096 AC116533.1-201ENST00000459748 321 ntBASIC3.92□□□□□ -1.78
NKX2-2O95096 RPL7P1-201ENST00000468161 747 ntBASIC3.92□□□□□ -1.78
NKX2-2O95096 RPL7P9-201ENST00000468715 747 ntBASIC3.92□□□□□ -1.78
NKX2-2O95096 RN7SL303P-201ENST00000469773 251 ntBASIC3.92□□□□□ -1.78
NKX2-2O95096 AC012170.1-201ENST00000495139 359 ntBASIC3.92□□□□□ -1.78
NKX2-2O95096 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.92□□□□□ -1.78
NKX2-2O95096 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NKX2-2O95096 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.92□□□□□ -1.78
NKX2-2O95096 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.92□□□□□ -1.78
NKX2-2O95096 AC008958.1-201ENST00000511047 682 ntBASIC3.92□□□□□ -1.78
NKX2-2O95096 AC010625.1-201ENST00000511296 403 ntBASIC3.92□□□□□ -1.78
NKX2-2O95096 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.92□□□□□ -1.78
NKX2-2O95096 RNA5SP519-201ENST00000516480 119 ntBASIC3.92□□□□□ -1.78
NKX2-2O95096 RNU6-759P-201ENST00000516740 103 ntBASIC3.92□□□□□ -1.78
NKX2-2O95096 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NKX2-2O95096 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.92□□□□□ -1.78
NKX2-2O95096 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NKX2-2O95096 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.92□□□□□ -1.78
NKX2-2O95096 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.92□□□□□ -1.78
NKX2-2O95096 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.92□□□□□ -1.78
NKX2-2O95096 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.92□□□□□ -1.78
NKX2-2O95096 PSMB7P1-201ENST00000556349 514 ntBASIC3.92□□□□□ -1.78
NKX2-2O95096 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.92□□□□□ -1.78
NKX2-2O95096 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.92□□□□□ -1.78
NKX2-2O95096 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.92□□□□□ -1.78
NKX2-2O95096 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.92□□□□□ -1.78
NKX2-2O95096 AC112230.1-201ENST00000604342 547 ntBASIC3.92□□□□□ -1.78
NKX2-2O95096 IGHV3-29-201ENST00000604817 344 ntBASIC3.92□□□□□ -1.78
NKX2-2O95096 MIR7702-201ENST00000621931 59 ntBASIC3.92□□□□□ -1.78
NKX2-2O95096 AC010608.2-201ENST00000624830 470 ntBASIC3.92□□□□□ -1.78
NKX2-2O95096 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
NKX2-2O95096 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
NKX2-2O95096 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms