Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SEMA3DO95025 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
SEMA3DO95025 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.19□□□□□ -1.9
SEMA3DO95025 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.19□□□□□ -1.9
SEMA3DO95025 METTL21EP-201ENST00000298105 713 ntBASIC3.19□□□□□ -1.9
SEMA3DO95025 RNA5SP197-201ENST00000363357 119 ntBASIC3.19□□□□□ -1.9
SEMA3DO95025 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
SEMA3DO95025 RNU6-1005P-201ENST00000384519 107 ntBASIC3.19□□□□□ -1.9
SEMA3DO95025 MIR134-201ENST00000385258 73 ntBASIC3.19□□□□□ -1.9
SEMA3DO95025 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SEMA3DO95025 PTMAP2-201ENST00000397627 327 ntBASIC3.19□□□□□ -1.9
SEMA3DO95025 DNAJC19P6-201ENST00000401853 280 ntBASIC3.19□□□□□ -1.9
SEMA3DO95025 HNRNPDP2-201ENST00000406475 478 ntBASIC3.19□□□□□ -1.9
SEMA3DO95025 AL583834.1-201ENST00000406943 343 ntBASIC3.19□□□□□ -1.9
SEMA3DO95025 RNA5SP107-201ENST00000411358 122 ntBASIC3.19□□□□□ -1.9
SEMA3DO95025 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.19□□□□□ -1.9
SEMA3DO95025 AC091286.1-201ENST00000431233 461 ntBASIC3.19□□□□□ -1.9
SEMA3DO95025 AC009969.1-201ENST00000438726 172 ntBASIC3.19□□□□□ -1.9
SEMA3DO95025 ATP5C1P1-201ENST00000441945 895 ntBASIC3.19□□□□□ -1.9
SEMA3DO95025 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.19□□□□□ -1.9
SEMA3DO95025 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.19□□□□□ -1.9
SEMA3DO95025 RPL7P52-201ENST00000449200 742 ntBASIC3.19□□□□□ -1.9
SEMA3DO95025 RPL23AP23-201ENST00000452590 471 ntBASIC3.19□□□□□ -1.9
SEMA3DO95025 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.19□□□□□ -1.9
SEMA3DO95025 RPS15AP1-201ENST00000457423 391 ntBASIC3.19□□□□□ -1.9
SEMA3DO95025 AC096992.1-201ENST00000459808 709 ntBASIC3.19□□□□□ -1.9
SEMA3DO95025 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.19□□□□□ -1.9
SEMA3DO95025 RPL21P13-201ENST00000488305 481 ntBASIC3.19□□□□□ -1.9
SEMA3DO95025 AC093663.1-201ENST00000497190 394 ntBASIC3.19□□□□□ -1.9
SEMA3DO95025 AC006499.5-201ENST00000505037 514 ntBASIC3.19□□□□□ -1.9
SEMA3DO95025 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.19□□□□□ -1.9
SEMA3DO95025 APOOP4-201ENST00000513530 597 ntBASIC3.19□□□□□ -1.9
SEMA3DO95025 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.19□□□□□ -1.9
SEMA3DO95025 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.19□□□□□ -1.9
SEMA3DO95025 AC104027.1-201ENST00000521887 300 ntBASIC3.19□□□□□ -1.9
SEMA3DO95025 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.19□□□□□ -1.9
SEMA3DO95025 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.19□□□□□ -1.9
SEMA3DO95025 AC025918.2-201ENST00000558683 763 ntBASIC3.19□□□□□ -1.9
SEMA3DO95025 AC233266.2-201ENST00000567067 528 ntBASIC3.19□□□□□ -1.9
SEMA3DO95025 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.19□□□□□ -1.9
SEMA3DO95025 AC015917.1-201ENST00000579654 510 ntBASIC3.19□□□□□ -1.9
SEMA3DO95025 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.19□□□□□ -1.9
SEMA3DO95025 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.19□□□□□ -1.9
SEMA3DO95025 AC091488.1-201ENST00000604239 660 ntBASIC3.19□□□□□ -1.9
SEMA3DO95025 AL109618.2-201ENST00000605527 211 ntBASIC3.19□□□□□ -1.9
SEMA3DO95025 MIR1264-201ENST00000616374 69 ntBASIC3.19□□□□□ -1.9
SEMA3DO95025 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SEMA3DO95025 MTCO1P24-201ENST00000515438 1558 ntBASIC3.19□□□□□ -1.9
SEMA3DO95025 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.19□□□□□ -1.9
SEMA3DO95025 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
SEMA3DO95025 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.18□□□□□ -1.9
SEMA3DO95025 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
SEMA3DO95025 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
SEMA3DO95025 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SEMA3DO95025 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SEMA3DO95025 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.18□□□□□ -1.9
SEMA3DO95025 BX842559.1-201ENST00000419615 532 ntBASIC3.18□□□□□ -1.9
SEMA3DO95025 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SEMA3DO95025 HMGN2P31-201ENST00000432430 273 ntBASIC3.18□□□□□ -1.9
SEMA3DO95025 Z99127.3-201ENST00000448158 395 ntBASIC3.18□□□□□ -1.9
SEMA3DO95025 PDSS1P2-201ENST00000449397 678 ntBASIC3.18□□□□□ -1.9
SEMA3DO95025 HMGN1P18-201ENST00000457642 277 ntBASIC3.18□□□□□ -1.9
SEMA3DO95025 AC108860.1-201ENST00000484521 383 ntBASIC3.18□□□□□ -1.9
SEMA3DO95025 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.18□□□□□ -1.9
SEMA3DO95025 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.18□□□□□ -1.9
SEMA3DO95025 SAP18P1-201ENST00000512058 390 ntBASIC3.18□□□□□ -1.9
SEMA3DO95025 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.18□□□□□ -1.9
SEMA3DO95025 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.18□□□□□ -1.9
SEMA3DO95025 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.18□□□□□ -1.9
SEMA3DO95025 AF279873.1-201ENST00000523393 313 ntBASIC3.18□□□□□ -1.9
SEMA3DO95025 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SEMA3DO95025 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.18□□□□□ -1.9
SEMA3DO95025 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SEMA3DO95025 AL731537.2-201ENST00000561565 951 ntBASIC3.18□□□□□ -1.9
SEMA3DO95025 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.18□□□□□ -1.9
SEMA3DO95025 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.18□□□□□ -1.9
SEMA3DO95025 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.18□□□□□ -1.9
SEMA3DO95025 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.18□□□□□ -1.9
SEMA3DO95025 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.18□□□□□ -1.9
SEMA3DO95025 SNRPGP15-201ENST00000600149 222 ntBASIC3.18□□□□□ -1.9
SEMA3DO95025 OR4H6P-202ENST00000603819 340 ntBASIC3.18□□□□□ -1.9
SEMA3DO95025 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.18□□□□□ -1.9
SEMA3DO95025 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.18□□□□□ -1.9
SEMA3DO95025 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SEMA3DO95025 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
SEMA3DO95025 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.18□□□□□ -1.9
SEMA3DO95025 AL355578.1-201ENST00000607405 1328 ntBASIC3.18□□□□□ -1.9
SEMA3DO95025 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SEMA3DO95025 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SEMA3DO95025 MTND4P21-201ENST00000453886 1357 ntBASIC3.17□□□□□ -1.9
SEMA3DO95025 MIR200C-201ENST00000384980 68 ntBASIC3.17□□□□□ -1.9
SEMA3DO95025 AL354719.1-201ENST00000406535 843 ntBASIC3.17□□□□□ -1.9
SEMA3DO95025 RNU2-65P-201ENST00000410162 185 ntBASIC3.17□□□□□ -1.9
SEMA3DO95025 NDUFB4P5-201ENST00000415445 361 ntBASIC3.17□□□□□ -1.9
SEMA3DO95025 AC245291.1-201ENST00000419501 328 ntBASIC3.17□□□□□ -1.9
SEMA3DO95025 AC244098.2-201ENST00000422068 99 ntBASIC3.17□□□□□ -1.9
SEMA3DO95025 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.17□□□□□ -1.9
SEMA3DO95025 RPL7P46-201ENST00000425129 740 ntBASIC3.17□□□□□ -1.9
SEMA3DO95025 FAR1P1-201ENST00000427163 934 ntBASIC3.17□□□□□ -1.9
SEMA3DO95025 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms