Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.9□□□□□ -1.79
ZIC3O60481 AC023575.1-201ENST00000580510 358 ntBASIC3.9□□□□□ -1.79
ZIC3O60481 MAGOH2P-202ENST00000584384 429 ntBASIC3.9□□□□□ -1.79
ZIC3O60481 AC008759.1-201ENST00000589783 983 ntBASIC3.9□□□□□ -1.79
ZIC3O60481 SLC25A36P1-201ENST00000590111 465 ntBASIC3.9□□□□□ -1.79
ZIC3O60481 AL590392.1-201ENST00000604960 446 ntBASIC3.9□□□□□ -1.79
ZIC3O60481 AC025588.4-201ENST00000615802 908 ntBASIC3.9□□□□□ -1.79
ZIC3O60481 AL445567.2-201ENST00000618935 498 ntBASIC3.9□□□□□ -1.79
ZIC3O60481 MIR3653-201ENST00000625572 110 ntBASIC3.9□□□□□ -1.79
ZIC3O60481 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
ZIC3O60481 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
ZIC3O60481 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.9□□□□□ -1.79
ZIC3O60481 AC000123.3-201ENST00000624029 4975 ntBASIC3.9□□□□□ -1.79
ZIC3O60481 AL592182.3-201ENST00000642132 3304 ntBASIC3.9□□□□□ -1.79
ZIC3O60481 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.9□□□□□ -1.79
ZIC3O60481 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
ZIC3O60481 MTND4P16-201ENST00000466108 1367 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
ZIC3O60481 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ZIC3O60481 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
ZIC3O60481 AC092104.1-201ENST00000497346 1441 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
ZIC3O60481 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ZIC3O60481 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ZIC3O60481 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
ZIC3O60481 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
ZIC3O60481 AL138880.1-201ENST00000405824 642 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 RN7SKP235-201ENST00000410662 305 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 ZNF885P-201ENST00000420174 1098 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 AC004448.2-201ENST00000422360 586 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 EIF1P3-201ENST00000423841 334 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.89□□□□□ -1.79
ZIC3O60481 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.89□□□□□ -1.79
ZIC3O60481 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.89□□□□□ -1.79
ZIC3O60481 MTCO1P27-201ENST00000448269 226 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 NUTF2P3-201ENST00000448540 384 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 ARPC3P5-201ENST00000448802 534 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.89□□□□□ -1.79
ZIC3O60481 USP9YP34-201ENST00000453983 808 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 RN7SL385P-201ENST00000468873 276 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 RN7SL817P-201ENST00000480777 288 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 AC105137.1-201ENST00000484355 562 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.89□□□□□ -1.79
ZIC3O60481 AC090453.1-201ENST00000495560 436 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 RNF138P1-201ENST00000502765 546 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 PGBD4P4-201ENST00000509673 613 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 MTCO3P7-201ENST00000510008 774 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 AC022790.1-201ENST00000522872 204 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 OR4A45P-201ENST00000529954 901 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.89□□□□□ -1.79
ZIC3O60481 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.89□□□□□ -1.79
ZIC3O60481 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.89□□□□□ -1.79
ZIC3O60481 PCMTD1P2-201ENST00000565017 355 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 AC141257.3-201ENST00000572906 215 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.89□□□□□ -1.79
ZIC3O60481 AC067852.4-201ENST00000590314 478 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.89□□□□□ -1.79
ZIC3O60481 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
ZIC3O60481 IPO5P1-202ENST00000600039 287 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 AC012360.2-201ENST00000609349 391 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 MIR6716-201ENST00000613413 80 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 AC006338.2-201ENST00000616864 791 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.89□□□□□ -1.79
ZIC3O60481 AL023881.1-201ENST00000621088 301 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 AC009878.1-201ENST00000621819 340 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 AL445363.3-201ENST00000623080 671 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 AC098679.4-201ENST00000624241 654 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 AC090582.1-201ENST00000636321 199 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 OR52H1-202ENST00000641796 1061 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.89□□□□□ -1.79
ZIC3O60481 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
ZIC3O60481 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
ZIC3O60481 MTCO1P23-201ENST00000415223 1526 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
ZIC3O60481 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ZIC3O60481 BCLAF1P2-201ENST00000624956 2609 ntBASIC3.89□□□□□ -1.79
ZIC3O60481 PABPC1P9-201ENST00000426076 1612 ntBASIC3.88□□□□□ -1.79
ZIC3O60481 SCN1A-220ENST00000641603 12506 ntBASIC3.88□□□□□ -1.79
ZIC3O60481 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
ZIC3O60481 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.88□□□□□ -1.79
ZIC3O60481 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.88□□□□□ -1.79
ZIC3O60481 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ZIC3O60481 RNU1-14P-201ENST00000362759 152 ntBASIC3.88□□□□□ -1.79
ZIC3O60481 RNU6-501P-201ENST00000364072 100 ntBASIC3.88□□□□□ -1.79
ZIC3O60481 RNU6-777P-201ENST00000364265 104 ntBASIC3.88□□□□□ -1.79
ZIC3O60481 RNU6-952P-201ENST00000391164 108 ntBASIC3.88□□□□□ -1.79
ZIC3O60481 RNA5SP36-201ENST00000410197 133 ntBASIC3.88□□□□□ -1.79
ZIC3O60481 RN7SKP142-201ENST00000411236 328 ntBASIC3.88□□□□□ -1.79
ZIC3O60481 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.88□□□□□ -1.79
ZIC3O60481 RPL31P2-201ENST00000413849 377 ntBASIC3.88□□□□□ -1.79
ZIC3O60481 TPMTP2-201ENST00000414372 726 ntBASIC3.88□□□□□ -1.79
ZIC3O60481 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.88□□□□□ -1.79
ZIC3O60481 UBTFL3-201ENST00000418934 1024 ntBASIC3.88□□□□□ -1.79
ZIC3O60481 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.88□□□□□ -1.79
ZIC3O60481 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
ZIC3O60481 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms