Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.56□□□□□ -1.84
PDLIM1O00151 AC022069.1-201ENST00000582910 658 ntBASIC3.56□□□□□ -1.84
PDLIM1O00151 AL137849.1-201ENST00000604767 169 ntBASIC3.56□□□□□ -1.84
PDLIM1O00151 AC009269.6-201ENST00000621778 588 ntBASIC3.56□□□□□ -1.84
PDLIM1O00151 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.56□□□□□ -1.84
PDLIM1O00151 AC004808.1-201ENST00000627671 721 ntBASIC3.56□□□□□ -1.84
PDLIM1O00151 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
PDLIM1O00151 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
PDLIM1O00151 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.55□□□□□ -1.84
PDLIM1O00151 AL021368.2-201ENST00000606125 5352 ntBASIC3.55□□□□□ -1.84
PDLIM1O00151 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PDLIM1O00151 RNU6-236P-201ENST00000363886 106 ntBASIC3.55□□□□□ -1.84
PDLIM1O00151 RNA5SP189-201ENST00000364920 115 ntBASIC3.55□□□□□ -1.84
PDLIM1O00151 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.55□□□□□ -1.84
PDLIM1O00151 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
PDLIM1O00151 TMSB4XP8-201ENST00000402089 135 ntBASIC3.55□□□□□ -1.84
PDLIM1O00151 AL136116.1-201ENST00000403591 381 ntBASIC3.55□□□□□ -1.84
PDLIM1O00151 RN7SKP263-201ENST00000411194 309 ntBASIC3.55□□□□□ -1.84
PDLIM1O00151 HMGB3P23-201ENST00000414981 585 ntBASIC3.55□□□□□ -1.84
PDLIM1O00151 TMSB4XP6-201ENST00000415187 135 ntBASIC3.55□□□□□ -1.84
PDLIM1O00151 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.55□□□□□ -1.84
PDLIM1O00151 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.55□□□□□ -1.84
PDLIM1O00151 TCEA1P2-201ENST00000420496 906 ntBASIC3.55□□□□□ -1.84
PDLIM1O00151 SFR1P2-201ENST00000421841 730 ntBASIC3.55□□□□□ -1.84
PDLIM1O00151 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.55□□□□□ -1.84
PDLIM1O00151 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.55□□□□□ -1.84
PDLIM1O00151 TMSB4XP1-201ENST00000424567 135 ntBASIC3.55□□□□□ -1.84
PDLIM1O00151 OSTCP5-201ENST00000425293 453 ntBASIC3.55□□□□□ -1.84
PDLIM1O00151 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.55□□□□□ -1.84
PDLIM1O00151 UBE2V1P1-201ENST00000430836 445 ntBASIC3.55□□□□□ -1.84
PDLIM1O00151 AL353705.1-201ENST00000433468 480 ntBASIC3.55□□□□□ -1.84
PDLIM1O00151 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.55□□□□□ -1.84
PDLIM1O00151 RPL21P89-201ENST00000444021 467 ntBASIC3.55□□□□□ -1.84
PDLIM1O00151 HMGN2P21-201ENST00000447764 270 ntBASIC3.55□□□□□ -1.84
PDLIM1O00151 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.55□□□□□ -1.84
PDLIM1O00151 RPS3AP50-201ENST00000487064 803 ntBASIC3.55□□□□□ -1.84
PDLIM1O00151 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.55□□□□□ -1.84
PDLIM1O00151 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.55□□□□□ -1.84
PDLIM1O00151 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.55□□□□□ -1.84
PDLIM1O00151 AC004024.1-201ENST00000549244 247 ntBASIC3.55□□□□□ -1.84
PDLIM1O00151 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PDLIM1O00151 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PDLIM1O00151 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.55□□□□□ -1.84
PDLIM1O00151 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.55□□□□□ -1.84
PDLIM1O00151 AL139022.2-201ENST00000606934 443 ntBASIC3.55□□□□□ -1.84
PDLIM1O00151 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.55□□□□□ -1.84
PDLIM1O00151 VN1R7P-201ENST00000619242 903 ntBASIC3.55□□□□□ -1.84
PDLIM1O00151 AC008264.2-201ENST00000610193 3731 ntBASIC3.55□□□□□ -1.84
PDLIM1O00151 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PDLIM1O00151 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PDLIM1O00151 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.54□□□□□ -1.84
PDLIM1O00151 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PDLIM1O00151 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
PDLIM1O00151 MIR148B-201ENST00000362252 99 ntBASIC3.54□□□□□ -1.84
PDLIM1O00151 RNA5SP479-201ENST00000364858 117 ntBASIC3.54□□□□□ -1.84
PDLIM1O00151 RNA5SP283-201ENST00000365604 119 ntBASIC3.54□□□□□ -1.84
PDLIM1O00151 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.54□□□□□ -1.84
PDLIM1O00151 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.54□□□□□ -1.84
PDLIM1O00151 RNU6-444P-201ENST00000383988 108 ntBASIC3.54□□□□□ -1.84
PDLIM1O00151 AL356967.1-201ENST00000406305 431 ntBASIC3.54□□□□□ -1.84
PDLIM1O00151 MIR1250-201ENST00000408098 113 ntBASIC3.54□□□□□ -1.84
PDLIM1O00151 RN7SKP123-201ENST00000410732 291 ntBASIC3.54□□□□□ -1.84
PDLIM1O00151 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.54□□□□□ -1.84
PDLIM1O00151 AL354692.1-201ENST00000423044 315 ntBASIC3.54□□□□□ -1.84
PDLIM1O00151 GLRXP1-201ENST00000423261 334 ntBASIC3.54□□□□□ -1.84
PDLIM1O00151 AC092634.2-201ENST00000428146 1010 ntBASIC3.54□□□□□ -1.84
PDLIM1O00151 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.54□□□□□ -1.84
PDLIM1O00151 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.54□□□□□ -1.84
PDLIM1O00151 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.54□□□□□ -1.84
PDLIM1O00151 HMGN3P1-201ENST00000453847 193 ntBASIC3.54□□□□□ -1.84
PDLIM1O00151 FCF1P6-201ENST00000456841 595 ntBASIC3.54□□□□□ -1.84
PDLIM1O00151 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.54□□□□□ -1.84
PDLIM1O00151 AC104982.1-201ENST00000478775 574 ntBASIC3.54□□□□□ -1.84
PDLIM1O00151 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.54□□□□□ -1.84
PDLIM1O00151 TMEM248P1-201ENST00000510579 951 ntBASIC3.54□□□□□ -1.84
PDLIM1O00151 AC005921.1-201ENST00000510589 286 ntBASIC3.54□□□□□ -1.84
PDLIM1O00151 AC108043.1-201ENST00000512696 574 ntBASIC3.54□□□□□ -1.84
PDLIM1O00151 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.54□□□□□ -1.84
PDLIM1O00151 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.54□□□□□ -1.84
PDLIM1O00151 OR4R3P-201ENST00000525084 838 ntBASIC3.54□□□□□ -1.84
PDLIM1O00151 NDUFS5P6-201ENST00000529136 295 ntBASIC3.54□□□□□ -1.84
PDLIM1O00151 OR4A12P-201ENST00000530847 918 ntBASIC3.54□□□□□ -1.84
PDLIM1O00151 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.54□□□□□ -1.84
PDLIM1O00151 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.54□□□□□ -1.84
PDLIM1O00151 AC087897.1-201ENST00000550134 156 ntBASIC3.54□□□□□ -1.84
PDLIM1O00151 AC010198.2-201ENST00000550612 259 ntBASIC3.54□□□□□ -1.84
PDLIM1O00151 AC044913.1-201ENST00000557200 430 ntBASIC3.54□□□□□ -1.84
PDLIM1O00151 KLKP1-201ENST00000595979 403 ntBASIC3.54□□□□□ -1.84
PDLIM1O00151 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.54□□□□□ -1.84
PDLIM1O00151 AC011468.4-201ENST00000603942 409 ntBASIC3.54□□□□□ -1.84
PDLIM1O00151 AC073387.2-201ENST00000604797 784 ntBASIC3.54□□□□□ -1.84
PDLIM1O00151 AC091167.4-201ENST00000605079 184 ntBASIC3.54□□□□□ -1.84
PDLIM1O00151 HSPE1P14-201ENST00000605812 302 ntBASIC3.54□□□□□ -1.84
PDLIM1O00151 AL583856.2-201ENST00000606298 543 ntBASIC3.54□□□□□ -1.84
PDLIM1O00151 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.54□□□□□ -1.84
PDLIM1O00151 AP000238.1-201ENST00000608759 426 ntBASIC3.54□□□□□ -1.84
PDLIM1O00151 AC093673.2-201ENST00000609674 331 ntBASIC3.54□□□□□ -1.84
PDLIM1O00151 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
PDLIM1O00151 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.54□□□□□ -1.84
PDLIM1O00151 AC079684.1-201ENST00000621405 437 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 154.6 ms