Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL160237.3-201ENST00000604114 1013 ntBASIC3.92□□□□□ -1.78
CCDC188H7C350 AL163642.2-201ENST00000604722 1019 ntBASIC3.92□□□□□ -1.78
CCDC188H7C350 AC073968.1-201ENST00000618594 637 ntBASIC3.92□□□□□ -1.78
CCDC188H7C350 AL158163.2-201ENST00000619110 700 ntBASIC3.92□□□□□ -1.78
CCDC188H7C350 AL713922.2-201ENST00000619384 716 ntBASIC3.92□□□□□ -1.78
CCDC188H7C350 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC188H7C350 AC022509.4-201ENST00000621404 572 ntBASIC3.92□□□□□ -1.78
CCDC188H7C350 AC079684.1-201ENST00000621405 437 ntBASIC3.92□□□□□ -1.78
CCDC188H7C350 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC188H7C350 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC188H7C350 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC188H7C350 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CCDC188H7C350 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.92□□□□□ -1.78
CCDC188H7C350 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
CCDC188H7C350 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC188H7C350 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC188H7C350 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CCDC188H7C350 RNA5SP97-201ENST00000365006 84 ntBASIC3.91□□□□□ -1.78
CCDC188H7C350 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC188H7C350 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC188H7C350 RNU6-761P-201ENST00000384148 107 ntBASIC3.91□□□□□ -1.78
CCDC188H7C350 SNORA40.2-201ENST00000390847 128 ntBASIC3.91□□□□□ -1.78
CCDC188H7C350 RNA5SP424-201ENST00000390988 115 ntBASIC3.91□□□□□ -1.78
CCDC188H7C350 RPS26P8-201ENST00000393490 348 ntBASIC3.91□□□□□ -1.78
CCDC188H7C350 AL161449.1-201ENST00000414531 1199 ntBASIC3.91□□□□□ -1.78
CCDC188H7C350 AC106883.1-201ENST00000418805 562 ntBASIC3.91□□□□□ -1.78
CCDC188H7C350 OFD1P18Y-201ENST00000420889 959 ntBASIC3.91□□□□□ -1.78
CCDC188H7C350 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC188H7C350 AC093698.1-201ENST00000423843 571 ntBASIC3.91□□□□□ -1.78
CCDC188H7C350 NANOGP5-201ENST00000424456 877 ntBASIC3.91□□□□□ -1.78
CCDC188H7C350 AC092648.1-201ENST00000425870 423 ntBASIC3.91□□□□□ -1.78
CCDC188H7C350 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.91□□□□□ -1.78
CCDC188H7C350 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC188H7C350 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.91□□□□□ -1.78
CCDC188H7C350 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC188H7C350 VN1R10P-201ENST00000447106 875 ntBASIC3.91□□□□□ -1.78
CCDC188H7C350 AC099563.1-201ENST00000456086 418 ntBASIC3.91□□□□□ -1.78
CCDC188H7C350 AC105137.1-201ENST00000484355 562 ntBASIC3.91□□□□□ -1.78
CCDC188H7C350 AC010460.2-201ENST00000509054 677 ntBASIC3.91□□□□□ -1.78
CCDC188H7C350 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC188H7C350 RN7SKP60-201ENST00000516985 239 ntBASIC3.91□□□□□ -1.78
CCDC188H7C350 RNU6-1231P-201ENST00000517185 103 ntBASIC3.91□□□□□ -1.78
CCDC188H7C350 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC188H7C350 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC188H7C350 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC188H7C350 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.91□□□□□ -1.78
CCDC188H7C350 AC007424.1-203ENST00000554613 687 ntBASIC3.91□□□□□ -1.78
CCDC188H7C350 AADACP1-206ENST00000561502 1193 ntBASIC3.91□□□□□ -1.78
CCDC188H7C350 AC009101.1-201ENST00000568135 242 ntBASIC3.91□□□□□ -1.78
CCDC188H7C350 AC091946.2-201ENST00000606105 291 ntBASIC3.91□□□□□ -1.78
CCDC188H7C350 SNORA62.6-201ENST00000606322 83 ntBASIC3.91□□□□□ -1.78
CCDC188H7C350 AC008083.4-201ENST00000615076 444 ntBASIC3.91□□□□□ -1.78
CCDC188H7C350 AL121895.2-201ENST00000619558 447 ntBASIC3.91□□□□□ -1.78
CCDC188H7C350 MKKS-204ENST00000639674 192 ntBASIC3.91□□□□□ -1.78
CCDC188H7C350 LINC02211-204ENST00000642024 1070 ntBASIC3.91□□□□□ -1.78
CCDC188H7C350 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC188H7C350 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.9□□□□□ -1.78
CCDC188H7C350 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC188H7C350 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
CCDC188H7C350 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC188H7C350 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC188H7C350 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC188H7C350 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CCDC188H7C350 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC188H7C350 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC188H7C350 RPL32P3-201ENST00000359025 275 ntBASIC3.9□□□□□ -1.79
CCDC188H7C350 MIR184-201ENST00000384962 84 ntBASIC3.9□□□□□ -1.79
CCDC188H7C350 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CCDC188H7C350 SNRPEP2-201ENST00000397592 279 ntBASIC3.9□□□□□ -1.79
CCDC188H7C350 MIR1183-201ENST00000408856 89 ntBASIC3.9□□□□□ -1.79
CCDC188H7C350 RN7SKP285-201ENST00000410137 318 ntBASIC3.9□□□□□ -1.79
CCDC188H7C350 HMGB3P20-201ENST00000417997 600 ntBASIC3.9□□□□□ -1.79
CCDC188H7C350 AL513174.1-201ENST00000423182 629 ntBASIC3.9□□□□□ -1.79
CCDC188H7C350 HSFY1P1-201ENST00000423928 1178 ntBASIC3.9□□□□□ -1.79
CCDC188H7C350 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC188H7C350 USP9YP24-201ENST00000434374 697 ntBASIC3.9□□□□□ -1.79
CCDC188H7C350 AC004854.1-201ENST00000440356 349 ntBASIC3.9□□□□□ -1.79
CCDC188H7C350 USP9YP17-201ENST00000444617 696 ntBASIC3.9□□□□□ -1.79
CCDC188H7C350 AC005410.1-202ENST00000460347 485 ntBASIC3.9□□□□□ -1.79
CCDC188H7C350 AC004801.2-202ENST00000463559 283 ntBASIC3.9□□□□□ -1.79
CCDC188H7C350 AP000873.1-201ENST00000463987 400 ntBASIC3.9□□□□□ -1.79
CCDC188H7C350 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.9□□□□□ -1.79
CCDC188H7C350 ACTG1P13-201ENST00000486987 1043 ntBASIC3.9□□□□□ -1.79
CCDC188H7C350 OR5H5P-201ENST00000503164 928 ntBASIC3.9□□□□□ -1.79
CCDC188H7C350 RNU6-1261P-201ENST00000517194 104 ntBASIC3.9□□□□□ -1.79
CCDC188H7C350 IGHV3-32-201ENST00000519182 355 ntBASIC3.9□□□□□ -1.79
CCDC188H7C350 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC188H7C350 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC188H7C350 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC188H7C350 AC136624.4-201ENST00000573044 370 ntBASIC3.9□□□□□ -1.79
CCDC188H7C350 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC188H7C350 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC188H7C350 RMST_8.1-201ENST00000610287 165 ntBASIC3.9□□□□□ -1.79
CCDC188H7C350 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CCDC188H7C350 MIR6758-201ENST00000620653 63 ntBASIC3.9□□□□□ -1.79
CCDC188H7C350 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CCDC188H7C350 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC188H7C350 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC188H7C350 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.9□□□□□ -1.79
CCDC188H7C350 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms