Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.69□□□□□ -1.34
RCCD1A6NED2 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.69□□□□□ -1.34
RCCD1A6NED2 AC004158.1-201ENST00000564508 4319 ntBASIC6.69□□□□□ -1.34
RCCD1A6NED2 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RCCD1A6NED2 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.69□□□□□ -1.34
RCCD1A6NED2 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RCCD1A6NED2 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RCCD1A6NED2 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.69□□□□□ -1.34
RCCD1A6NED2 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RCCD1A6NED2 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
RCCD1A6NED2 AL033543.1-201ENST00000623440 13454 ntBASIC6.69□□□□□ -1.34
RCCD1A6NED2 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.69□□□□□ -1.34
RCCD1A6NED2 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RCCD1A6NED2 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.68□□□□□ -1.34
RCCD1A6NED2 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.68□□□□□ -1.34
RCCD1A6NED2 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.68□□□□□ -1.34
RCCD1A6NED2 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RCCD1A6NED2 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RCCD1A6NED2 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
RCCD1A6NED2 ANKRD36BP1-201ENST00000358576 1779 ntBASIC6.68□□□□□ -1.34
RCCD1A6NED2 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RCCD1A6NED2 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
RCCD1A6NED2 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RCCD1A6NED2 SNORD16-201ENST00000362803 99 ntBASIC6.68□□□□□ -1.34
RCCD1A6NED2 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RCCD1A6NED2 HMGB1P20-201ENST00000402555 677 ntBASIC6.68□□□□□ -1.34
RCCD1A6NED2 AL133260.1-201ENST00000405720 405 ntBASIC6.68□□□□□ -1.34
RCCD1A6NED2 AP000275.1-201ENST00000411943 390 ntBASIC6.68□□□□□ -1.34
RCCD1A6NED2 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.68□□□□□ -1.34
RCCD1A6NED2 MYL8P-204ENST00000431574 518 ntBASIC6.68□□□□□ -1.34
RCCD1A6NED2 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC6.68□□□□□ -1.34
RCCD1A6NED2 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.68□□□□□ -1.34
RCCD1A6NED2 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RCCD1A6NED2 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RCCD1A6NED2 PCMTD1P1-201ENST00000455560 355 ntBASIC6.68□□□□□ -1.34
RCCD1A6NED2 snoU13.7-201ENST00000459220 104 ntBASIC6.68□□□□□ -1.34
RCCD1A6NED2 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
RCCD1A6NED2 AC004453.1-201ENST00000487895 408 ntBASIC6.68□□□□□ -1.34
RCCD1A6NED2 AC105384.2-201ENST00000508433 640 ntBASIC6.68□□□□□ -1.34
RCCD1A6NED2 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC6.68□□□□□ -1.34
RCCD1A6NED2 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.68□□□□□ -1.34
RCCD1A6NED2 AC130366.1-201ENST00000526505 1192 ntBASIC6.68□□□□□ -1.34
RCCD1A6NED2 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.68□□□□□ -1.34
RCCD1A6NED2 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.68□□□□□ -1.34
RCCD1A6NED2 MRPS21P9-201ENST00000571150 257 ntBASIC6.68□□□□□ -1.34
RCCD1A6NED2 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.68□□□□□ -1.34
RCCD1A6NED2 RPS29P30-201ENST00000600975 111 ntBASIC6.68□□□□□ -1.34
RCCD1A6NED2 AC006557.5-201ENST00000603126 811 ntBASIC6.68□□□□□ -1.34
RCCD1A6NED2 AC064801.1-201ENST00000612025 407 ntBASIC6.68□□□□□ -1.34
RCCD1A6NED2 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC6.68□□□□□ -1.34
RCCD1A6NED2 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RCCD1A6NED2 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RCCD1A6NED2 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
RCCD1A6NED2 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.68□□□□□ -1.34
RCCD1A6NED2 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RCCD1A6NED2 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RCCD1A6NED2 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.68□□□□□ -1.34
RCCD1A6NED2 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RCCD1A6NED2 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.68□□□□□ -1.34
RCCD1A6NED2 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RCCD1A6NED2 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RCCD1A6NED2 PANDAR-201ENST00000629595 1506 ntBASIC6.67□□□□□ -1.34
RCCD1A6NED2 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RCCD1A6NED2 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
RCCD1A6NED2 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RCCD1A6NED2 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
RCCD1A6NED2 RNA5SP308-201ENST00000362532 115 ntBASIC6.67□□□□□ -1.34
RCCD1A6NED2 RNY3P11-201ENST00000364153 102 ntBASIC6.67□□□□□ -1.34
RCCD1A6NED2 RNY1-201ENST00000364228 113 ntBASIC6.67□□□□□ -1.34
RCCD1A6NED2 Y_RNA.274-201ENST00000364714 101 ntBASIC6.67□□□□□ -1.34
RCCD1A6NED2 RNU6-637P-201ENST00000384050 107 ntBASIC6.67□□□□□ -1.34
RCCD1A6NED2 AL353133.1-201ENST00000407695 401 ntBASIC6.67□□□□□ -1.34
RCCD1A6NED2 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.67□□□□□ -1.34
RCCD1A6NED2 COL11A2P1-205ENST00000441798 676 ntBASIC6.67□□□□□ -1.34
RCCD1A6NED2 RPS3AP46-201ENST00000448352 682 ntBASIC6.67□□□□□ -1.34
RCCD1A6NED2 RNU7-138P-201ENST00000459479 64 ntBASIC6.67□□□□□ -1.34
RCCD1A6NED2 AC022868.1-201ENST00000517767 391 ntBASIC6.67□□□□□ -1.34
RCCD1A6NED2 AC144568.1-201ENST00000520139 137 ntBASIC6.67□□□□□ -1.34
RCCD1A6NED2 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RCCD1A6NED2 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.67□□□□□ -1.34
RCCD1A6NED2 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.67□□□□□ -1.34
RCCD1A6NED2 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.67□□□□□ -1.34
RCCD1A6NED2 AC005332.4-201ENST00000592752 579 ntBASIC6.67□□□□□ -1.34
RCCD1A6NED2 MIR6849-201ENST00000618543 69 ntBASIC6.67□□□□□ -1.34
RCCD1A6NED2 AC007998.5-201ENST00000622938 237 ntBASIC6.67□□□□□ -1.34
RCCD1A6NED2 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.67□□□□□ -1.34
RCCD1A6NED2 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RCCD1A6NED2 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RCCD1A6NED2 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.67□□□□□ -1.34
RCCD1A6NED2 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.67□□□□□ -1.34
RCCD1A6NED2 AL122126.1-201ENST00000546905 1318 ntBASIC6.67□□□□□ -1.34
RCCD1A6NED2 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.66□□□□□ -1.34
RCCD1A6NED2 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.66□□□□□ -1.34
RCCD1A6NED2 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
RCCD1A6NED2 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
RCCD1A6NED2 AL031119.1-201ENST00000404707 1879 ntBASIC6.66□□□□□ -1.34
RCCD1A6NED2 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RCCD1A6NED2 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RCCD1A6NED2 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
RCCD1A6NED2 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms