Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 RPL7P59-201ENST00000447700 943 ntBASIC2.57□□□□□ -2
TRAV27A0A087WT01 RAB28P3-201ENST00000448325 597 ntBASIC2.57□□□□□ -2
TRAV27A0A087WT01 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.57□□□□□ -2
TRAV27A0A087WT01 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.57□□□□□ -2
TRAV27A0A087WT01 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.57□□□□□ -2
TRAV27A0A087WT01 RPL7P5-201ENST00000471472 736 ntBASIC2.57□□□□□ -2
TRAV27A0A087WT01 RPS4XP13-201ENST00000483219 789 ntBASIC2.57□□□□□ -2
TRAV27A0A087WT01 DYNLL1P6-201ENST00000503440 264 ntBASIC2.57□□□□□ -2
TRAV27A0A087WT01 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.57□□□□□ -2
TRAV27A0A087WT01 AC108043.1-201ENST00000512696 574 ntBASIC2.57□□□□□ -2
TRAV27A0A087WT01 SCGB1D5P-201ENST00000515134 247 ntBASIC2.57□□□□□ -2
TRAV27A0A087WT01 RNA5SP385-201ENST00000515947 110 ntBASIC2.57□□□□□ -2
TRAV27A0A087WT01 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.57□□□□□ -2
TRAV27A0A087WT01 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC2.57□□□□□ -2
TRAV27A0A087WT01 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.57□□□□□ -2
TRAV27A0A087WT01 MIR1254-2-201ENST00000579553 63 ntBASIC2.57□□□□□ -2
TRAV27A0A087WT01 AC084373.1-201ENST00000603311 235 ntBASIC2.57□□□□□ -2
TRAV27A0A087WT01 IGHV3-29-201ENST00000604817 344 ntBASIC2.57□□□□□ -2
TRAV27A0A087WT01 YPEL5P2-201ENST00000605553 359 ntBASIC2.57□□□□□ -2
TRAV27A0A087WT01 AL451074.6-201ENST00000608512 729 ntBASIC2.57□□□□□ -2
TRAV27A0A087WT01 METTL8-218ENST00000638989 876 ntTSL 5 BASIC2.57□□□□□ -2
TRAV27A0A087WT01 METTL8-219ENST00000640734 726 ntTSL 2 BASIC2.57□□□□□ -2
TRAV27A0A087WT01 MTND5P1-201ENST00000445440 1375 ntBASIC2.57□□□□□ -2
TRAV27A0A087WT01 AP003122.5-201ENST00000527668 3766 ntBASIC2.57□□□□□ -2
TRAV27A0A087WT01 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.57□□□□□ -2
TRAV27A0A087WT01 AC092593.1-201ENST00000515413 1815 ntBASIC2.56□□□□□ -2
TRAV27A0A087WT01 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TRAV27A0A087WT01 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC2.56□□□□□ -2
TRAV27A0A087WT01 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TRAV27A0A087WT01 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
TRAV27A0A087WT01 RNU6-167P-201ENST00000384292 106 ntBASIC2.56□□□□□ -2
TRAV27A0A087WT01 SNORD88.1-201ENST00000408684 91 ntBASIC2.56□□□□□ -2
TRAV27A0A087WT01 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TRAV27A0A087WT01 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.56□□□□□ -2
TRAV27A0A087WT01 AC004987.3-201ENST00000413879 771 ntBASIC2.56□□□□□ -2
TRAV27A0A087WT01 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.56□□□□□ -2
TRAV27A0A087WT01 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.56□□□□□ -2
TRAV27A0A087WT01 RPL7P46-201ENST00000425129 740 ntBASIC2.56□□□□□ -2
TRAV27A0A087WT01 AC093151.1-201ENST00000427711 313 ntBASIC2.56□□□□□ -2
TRAV27A0A087WT01 DPPA2P1-201ENST00000428060 556 ntBASIC2.56□□□□□ -2
TRAV27A0A087WT01 AL512649.1-201ENST00000428997 581 ntBASIC2.56□□□□□ -2
TRAV27A0A087WT01 HIGD1AP11-201ENST00000438361 280 ntBASIC2.56□□□□□ -2
TRAV27A0A087WT01 TRIM60P18-201ENST00000441518 828 ntBASIC2.56□□□□□ -2
TRAV27A0A087WT01 AL358232.1-201ENST00000448030 501 ntBASIC2.56□□□□□ -2
TRAV27A0A087WT01 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.56□□□□□ -2
TRAV27A0A087WT01 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.56□□□□□ -2
TRAV27A0A087WT01 NIPA2P5-201ENST00000452282 464 ntBASIC2.56□□□□□ -2
TRAV27A0A087WT01 AC114982.2-201ENST00000461396 358 ntBASIC2.56□□□□□ -2
TRAV27A0A087WT01 AC091179.1-201ENST00000461606 579 ntBASIC2.56□□□□□ -2
TRAV27A0A087WT01 AC003982.1-202ENST00000469928 248 ntBASIC2.56□□□□□ -2
TRAV27A0A087WT01 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
TRAV27A0A087WT01 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.56□□□□□ -2
TRAV27A0A087WT01 RPL31P13-201ENST00000484151 370 ntBASIC2.56□□□□□ -2
TRAV27A0A087WT01 RPL21P129-201ENST00000491732 478 ntBASIC2.56□□□□□ -2
TRAV27A0A087WT01 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.56□□□□□ -2
TRAV27A0A087WT01 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC2.56□□□□□ -2
TRAV27A0A087WT01 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.56□□□□□ -2
TRAV27A0A087WT01 HPRT1P3-201ENST00000539521 576 ntBASIC2.56□□□□□ -2
TRAV27A0A087WT01 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.56□□□□□ -2
TRAV27A0A087WT01 AC107016.2-201ENST00000547968 190 ntBASIC2.56□□□□□ -2
TRAV27A0A087WT01 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC2.56□□□□□ -2
TRAV27A0A087WT01 AC006504.3-201ENST00000586818 523 ntBASIC2.56□□□□□ -2
TRAV27A0A087WT01 SRGNP1-201ENST00000603392 451 ntBASIC2.56□□□□□ -2
TRAV27A0A087WT01 AL355816.1-201ENST00000607951 118 ntBASIC2.56□□□□□ -2
TRAV27A0A087WT01 ATP5A1P2-202ENST00000616464 443 ntBASIC2.56□□□□□ -2
TRAV27A0A087WT01 AC006111.3-201ENST00000622137 383 ntBASIC2.56□□□□□ -2
TRAV27A0A087WT01 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.56□□□□□ -2
TRAV27A0A087WT01 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
TRAV27A0A087WT01 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC2.56□□□□□ -2
TRAV27A0A087WT01 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
TRAV27A0A087WT01 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TRAV27A0A087WT01 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC2.55□□□□□ -2
TRAV27A0A087WT01 MIR422A-201ENST00000362286 90 ntBASIC2.55□□□□□ -2
TRAV27A0A087WT01 AC240504.1-201ENST00000395709 845 ntBASIC2.55□□□□□ -2
TRAV27A0A087WT01 AL355379.1-201ENST00000405542 640 ntBASIC2.55□□□□□ -2
TRAV27A0A087WT01 RN7SKP123-201ENST00000410732 291 ntBASIC2.55□□□□□ -2
TRAV27A0A087WT01 RNU2-6P-201ENST00000411404 190 ntBASIC2.55□□□□□ -2
TRAV27A0A087WT01 AC004022.2-201ENST00000413824 193 ntBASIC2.55□□□□□ -2
TRAV27A0A087WT01 HMGB1P12-201ENST00000438594 598 ntBASIC2.55□□□□□ -2
TRAV27A0A087WT01 RPL29P29-201ENST00000448725 423 ntBASIC2.55□□□□□ -2
TRAV27A0A087WT01 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC2.55□□□□□ -2
TRAV27A0A087WT01 AC112492.1-201ENST00000449607 712 ntBASIC2.55□□□□□ -2
TRAV27A0A087WT01 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.55□□□□□ -2
TRAV27A0A087WT01 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.55□□□□□ -2
TRAV27A0A087WT01 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.55□□□□□ -2
TRAV27A0A087WT01 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.55□□□□□ -2
TRAV27A0A087WT01 AC002456.2-201ENST00000509356 380 ntBASIC2.55□□□□□ -2
TRAV27A0A087WT01 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.55□□□□□ -2
TRAV27A0A087WT01 AP002404.1-201ENST00000532005 451 ntBASIC2.55□□□□□ -2
TRAV27A0A087WT01 AP000857.1-201ENST00000532151 543 ntBASIC2.55□□□□□ -2
TRAV27A0A087WT01 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.55□□□□□ -2
TRAV27A0A087WT01 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.55□□□□□ -2
TRAV27A0A087WT01 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.55□□□□□ -2
TRAV27A0A087WT01 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.55□□□□□ -2
TRAV27A0A087WT01 MIR4474-201ENST00000579189 78 ntBASIC2.55□□□□□ -2
TRAV27A0A087WT01 AC079880.2-201ENST00000603790 1213 ntBASIC2.55□□□□□ -2
TRAV27A0A087WT01 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.55□□□□□ -2
TRAV27A0A087WT01 AC012213.4-201ENST00000606457 354 ntBASIC2.55□□□□□ -2
TRAV27A0A087WT01 AC005046.1-201ENST00000608515 625 ntBASIC2.55□□□□□ -2
TRAV27A0A087WT01 AL159169.3-201ENST00000608871 561 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms