Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AL355596.1-201ENST00000565399 3996 ntBASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HLA-DRB4X5D2U9 AC093010.3-201ENST00000570269 15214 ntBASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 Y_RNA.62-201ENST00000362840 99 ntBASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 RNU6-666P-201ENST00000363499 107 ntBASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 SNORA48.7-201ENST00000391302 135 ntBASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 RNU2-71P-201ENST00000411395 189 ntBASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 HSPE1P1-201ENST00000421494 318 ntBASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 YME1L1P1-201ENST00000429435 297 ntBASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 RPL23AP33-201ENST00000442301 452 ntBASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 RPL6P5-201ENST00000445678 828 ntBASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 ELOCP23-201ENST00000452014 332 ntBASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 PRSS3P4-201ENST00000453323 162 ntBASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 RN7SL601P-201ENST00000471221 293 ntBASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 RPL32P34-201ENST00000486380 400 ntBASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 AP001207.2-201ENST00000519490 539 ntBASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 AC239860.2-201ENST00000525886 270 ntBASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 MIR1254-2-201ENST00000579553 63 ntBASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 MIR4444-1-201ENST00000581696 74 ntBASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 MIR4444-2-201ENST00000584390 74 ntBASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 SNRPGP15-201ENST00000600149 222 ntBASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 SNORA35B-201ENST00000607417 129 ntBASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 AC055764.2-201ENST00000610089 670 ntBASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 AL591516.1-201ENST00000611326 274 ntBASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 AC131902.3-201ENST00000611767 581 ntBASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 uc_338.25-201ENST00000613756 156 ntBASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HLA-DRB4X5D2U9 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 SNORA71.3-201ENST00000362582 128 ntBASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 SNORA26.7-201ENST00000391288 122 ntBASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 HMGB3P6-201ENST00000444896 598 ntBASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 MTND2P8-201ENST00000450555 1025 ntBASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 GSTA11P-201ENST00000452866 669 ntBASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 AC109925.1-201ENST00000478069 331 ntBASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 RN7SKP43-201ENST00000516173 320 ntBASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 MTCYBP41-201ENST00000528913 1123 ntBASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 AL157394.1-201ENST00000562983 1224 ntBASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 MIR2682-201ENST00000580305 110 ntBASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 AC090616.5-202ENST00000582111 297 ntBASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 AL390240.1-201ENST00000612950 384 ntBASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
HLA-DRB4X5D2U9 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.36□□□□□ -2.03
HLA-DRB4X5D2U9 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms