Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC048347.1-201ENST00000624621 427 ntBASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 AP005264.7-201ENST00000625003 745 ntBASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 AP004289.2-201ENST00000444413 1457 ntBASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHGA1Q9Y5H4 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 AF127577.6-201ENST00000623352 2191 ntBASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 RNU6-251P-201ENST00000363235 104 ntBASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 RNU6-839P-201ENST00000363347 108 ntBASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 RNU6-1181P-201ENST00000384191 106 ntBASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 ZNF602P-201ENST00000405929 924 ntBASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 MTND2P16-201ENST00000419987 799 ntBASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 C1DP1-201ENST00000426049 402 ntBASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 AC073335.1-201ENST00000427776 363 ntBASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 NPM1P13-201ENST00000452663 865 ntBASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 snoU13.3-201ENST00000459441 104 ntBASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 RPL21P104-201ENST00000464143 478 ntBASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 CAB39P1-201ENST00000502277 460 ntBASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 AC109471.1-201ENST00000511631 612 ntBASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 IGKV2D-36-201ENST00000518643 226 ntBASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 AC021451.1-201ENST00000523498 1129 ntBASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 LRRC6P1-201ENST00000532188 885 ntBASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 AC063950.1-201ENST00000552036 308 ntBASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 MIR4644-201ENST00000579929 84 ntBASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 AC005412.1-201ENST00000580812 1049 ntBASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 AC096577.2-201ENST00000611455 153 ntBASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 AC026634.1-201ENST00000634369 198 ntBASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 AF001550.2-201ENST00000636643 217 ntBASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 AC000367.1-201ENST00000452711 1766 ntBASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 AC073346.2-201ENST00000624724 2058 ntBASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCDHGA1Q9Y5H4 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 RNU6-582P-201ENST00000362989 107 ntBASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 RNU6-1066P-201ENST00000363573 105 ntBASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 SNORD74.4-201ENST00000364129 80 ntBASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 RNU6-374P-201ENST00000364146 108 ntBASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 RNA5SP72-201ENST00000364442 117 ntBASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 RNA5SP97-201ENST00000365006 84 ntBASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 SNORD116-23-201ENST00000384645 92 ntBASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 RPL21P17-201ENST00000397467 475 ntBASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 RNA5SP56-201ENST00000410277 118 ntBASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 HSFY1P1-201ENST00000423928 1178 ntBASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 MTCYBP32-201ENST00000427945 1084 ntBASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 AL358794.1-201ENST00000445689 381 ntBASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 AC104164.3-201ENST00000467363 1258 ntBASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 UBE2CP3-201ENST00000502715 450 ntBASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 AC110768.1-201ENST00000509222 400 ntBASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 AC009101.1-201ENST00000568135 242 ntBASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 AC110741.2-201ENST00000605278 268 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms