Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AP003385.6-201ENST00000531603 374 ntBASIC4.85□□□□□ -1.63
PCDHGA3Q9Y5H0 AC022882.1-201ENST00000532142 501 ntBASIC4.85□□□□□ -1.63
PCDHGA3Q9Y5H0 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.85□□□□□ -1.63
PCDHGA3Q9Y5H0 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.85□□□□□ -1.63
PCDHGA3Q9Y5H0 AC079075.1-201ENST00000559543 878 ntBASIC4.85□□□□□ -1.63
PCDHGA3Q9Y5H0 AC010546.1-201ENST00000569391 485 ntBASIC4.85□□□□□ -1.63
PCDHGA3Q9Y5H0 MTND1P15-201ENST00000579262 949 ntBASIC4.85□□□□□ -1.63
PCDHGA3Q9Y5H0 AC105254.2-201ENST00000603636 436 ntBASIC4.85□□□□□ -1.63
PCDHGA3Q9Y5H0 AC006566.1-201ENST00000608943 513 ntBASIC4.85□□□□□ -1.63
PCDHGA3Q9Y5H0 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.85□□□□□ -1.63
PCDHGA3Q9Y5H0 MIR6780A-201ENST00000615089 68 ntBASIC4.85□□□□□ -1.63
PCDHGA3Q9Y5H0 AC008250.2-201ENST00000615261 205 ntBASIC4.85□□□□□ -1.63
PCDHGA3Q9Y5H0 U73479.1-201ENST00000618062 168 ntBASIC4.85□□□□□ -1.63
PCDHGA3Q9Y5H0 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.85□□□□□ -1.63
PCDHGA3Q9Y5H0 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHGA3Q9Y5H0 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.85□□□□□ -1.63
PCDHGA3Q9Y5H0 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.85□□□□□ -1.63
PCDHGA3Q9Y5H0 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHGA3Q9Y5H0 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.85□□□□□ -1.63
PCDHGA3Q9Y5H0 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.85□□□□□ -1.63
PCDHGA3Q9Y5H0 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
PCDHGA3Q9Y5H0 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.85□□□□□ -1.63
PCDHGA3Q9Y5H0 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.85□□□□□ -1.63
PCDHGA3Q9Y5H0 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHGA3Q9Y5H0 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHGA3Q9Y5H0 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 MAPK10-320ENST00000641462 6696 ntBASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 MAPK10-263ENST00000641052 4307 ntBASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 RNU6-356P-201ENST00000384140 107 ntBASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 MIR589-201ENST00000385238 99 ntBASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 RNU2-66P-201ENST00000410650 161 ntBASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 AC010975.2-201ENST00000427781 588 ntBASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 OR2B8P-201ENST00000432841 938 ntBASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 UBE2V1P13-201ENST00000436983 439 ntBASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 AC073614.1-201ENST00000438690 650 ntBASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 AL357520.1-201ENST00000441557 453 ntBASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 AC244505.5-201ENST00000443639 207 ntBASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 AC112498.1-201ENST00000444401 332 ntBASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 ACTR3P3-201ENST00000480448 893 ntBASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 AC023424.2-201ENST00000493479 777 ntBASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 COX7A2P2-201ENST00000505291 250 ntBASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 MTCO3P44-201ENST00000510977 541 ntBASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 AP003465.2-201ENST00000602571 373 ntBASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 AC073091.2-201ENST00000603205 907 ntBASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 AC233280.2-201ENST00000603917 1070 ntBASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 AP001521.2-201ENST00000608772 546 ntBASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 AC009237.17-201ENST00000618111 748 ntBASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 AC072046.2-201ENST00000618366 268 ntBASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 BX005214.3-202ENST00000619809 325 ntBASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 MIR7641-1-201ENST00000627518 61 ntBASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.84□□□□□ -1.63
PCDHGA3Q9Y5H0 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
PCDHGA3Q9Y5H0 SCN1A-220ENST00000641603 12506 ntBASIC4.84□□□□□ -1.64
PCDHGA3Q9Y5H0 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
PCDHGA3Q9Y5H0 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
PCDHGA3Q9Y5H0 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.84□□□□□ -1.64
PCDHGA3Q9Y5H0 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
PCDHGA3Q9Y5H0 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 AC079741.1-201ENST00000321498 212 ntBASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 RNU6-97P-201ENST00000363387 104 ntBASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 MIR153-1-201ENST00000384914 90 ntBASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 Y_RNA.582-201ENST00000391023 95 ntBASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 AL049693.1-201ENST00000402760 611 ntBASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 RNU2-8P-201ENST00000410727 190 ntBASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 RAB28P1-201ENST00000411517 641 ntBASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 RPS3AP3-201ENST00000411933 242 ntBASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 HMGB3P23-201ENST00000414981 585 ntBASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 AC004690.1-201ENST00000418216 328 ntBASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 MTCYBP24-201ENST00000420387 1106 ntBASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms