Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 MIR4509-3-201ENST00000578671 94 ntBASIC3.82□□□□□ -1.8
NCKAP1Q9Y2A7 MIR4644-201ENST00000579929 84 ntBASIC3.82□□□□□ -1.8
NCKAP1Q9Y2A7 MIR4509-2-201ENST00000583920 94 ntBASIC3.82□□□□□ -1.8
NCKAP1Q9Y2A7 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.82□□□□□ -1.8
NCKAP1Q9Y2A7 AC110741.2-201ENST00000605278 268 ntBASIC3.82□□□□□ -1.8
NCKAP1Q9Y2A7 AP003117.2-201ENST00000606010 545 ntBASIC3.82□□□□□ -1.8
NCKAP1Q9Y2A7 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NCKAP1Q9Y2A7 MIR4509-1-201ENST00000618224 94 ntBASIC3.82□□□□□ -1.8
NCKAP1Q9Y2A7 AC010975.3-201ENST00000618727 978 ntBASIC3.82□□□□□ -1.8
NCKAP1Q9Y2A7 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.82□□□□□ -1.8
NCKAP1Q9Y2A7 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.82□□□□□ -1.8
NCKAP1Q9Y2A7 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
NCKAP1Q9Y2A7 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NCKAP1Q9Y2A7 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NCKAP1Q9Y2A7 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.82□□□□□ -1.8
NCKAP1Q9Y2A7 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.82□□□□□ -1.8
NCKAP1Q9Y2A7 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 MTND5P28-201ENST00000438005 1594 ntBASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 AC106754.1-201ENST00000562632 1513 ntBASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 AL355578.1-201ENST00000607405 1328 ntBASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 RNU6-582P-201ENST00000362989 107 ntBASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 RNU6-1243P-201ENST00000364028 107 ntBASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 RNA5SP167-201ENST00000365461 116 ntBASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 RNU6-444P-201ENST00000383988 108 ntBASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 MIR23A-201ENST00000385245 73 ntBASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 RNU6-584P-201ENST00000410350 95 ntBASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 RPS29P4-201ENST00000414733 161 ntBASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 IFNNP1-201ENST00000429219 553 ntBASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 KCTD9P3-201ENST00000434597 1169 ntBASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 B3GNT2P1-201ENST00000434960 952 ntBASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 AL031313.1-201ENST00000448435 256 ntBASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 AL009048.1-201ENST00000450437 298 ntBASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 RPL9P32-201ENST00000464118 620 ntBASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 AC079203.1-201ENST00000487972 404 ntBASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 RNU6-885P-201ENST00000516607 104 ntBASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 IGKV2D-23-201ENST00000518179 286 ntBASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 IGKV2D-19-201ENST00000523346 262 ntBASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 AP001207.1-201ENST00000524051 481 ntBASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 LRRC6P1-201ENST00000532188 885 ntBASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 MTCYBP28-201ENST00000566728 1132 ntBASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 MTND1P8-201ENST00000571424 950 ntBASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 AC105148.1-201ENST00000604961 409 ntBASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 AC128687.2-201ENST00000609657 566 ntBASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 PART1_2.1-201ENST00000612397 250 ntBASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 AC012314.7-201ENST00000619693 93 ntBASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 FAM157B-203ENST00000639350 358 ntBASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NCKAP1Q9Y2A7 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 MAPK10-372ENST00000641954 3413 ntBASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 AC011978.2-201ENST00000569835 2054 ntBASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 SNORA63.1-201ENST00000362493 131 ntBASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 Y_RNA.472-201ENST00000384322 102 ntBASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 SNORD3H-201ENST00000384486 214 ntBASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 FCF1P2-201ENST00000415284 583 ntBASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 AC096638.2-201ENST00000434965 711 ntBASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 HSPD1P21-201ENST00000436541 245 ntBASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 GTF2IP7-202ENST00000436677 309 ntBASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 AC112492.1-201ENST00000449607 712 ntBASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 ANP32BP2-201ENST00000454525 545 ntBASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 DYNLL1P6-201ENST00000503440 264 ntBASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms