Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RNU6-1137P-201ENST00000517073 99 ntBASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 RNU6-264P-201ENST00000517134 104 ntBASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 AC092490.3-201ENST00000545370 572 ntBASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 AC128657.1-201ENST00000549459 145 ntBASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 AC008269.2-201ENST00000561915 1105 ntBASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 AC018552.3-201ENST00000567416 561 ntBASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 AC011447.4-201ENST00000587562 111 ntBASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 AP000654.2-201ENST00000605633 586 ntBASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ZC3H4Q9UPT8 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 SNORA17.1-201ENST00000362945 126 ntBASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 RNU6-38P-201ENST00000384085 107 ntBASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 RNU6-441P-201ENST00000384545 106 ntBASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 Y_RNA.530-201ENST00000384587 101 ntBASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 MIR649-201ENST00000384843 97 ntBASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 TRAPPC2P5-201ENST00000426293 308 ntBASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 PPIAP13-201ENST00000434706 478 ntBASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 AL731563.1-201ENST00000442202 214 ntBASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 TPT1P12-201ENST00000448968 492 ntBASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 AC112187.1-201ENST00000455837 479 ntBASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 RPL30P15-201ENST00000457129 321 ntBASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 RNU6-1218P-201ENST00000458990 108 ntBASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 RNU6-333P-201ENST00000459117 107 ntBASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 MTATP8P1-201ENST00000467115 207 ntBASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 RN7SL809P-201ENST00000482040 297 ntBASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 MTND4LP22-201ENST00000508209 276 ntBASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 RNU6-864P-201ENST00000516256 108 ntBASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 RN7SKP99-201ENST00000517028 307 ntBASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 AC007494.1-201ENST00000562293 760 ntBASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 MIR3942-201ENST00000585264 109 ntBASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 AL022099.1-201ENST00000604551 712 ntBASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 AL033543.1-201ENST00000623440 13454 ntBASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 AC083837.1-201ENST00000565297 2994 ntBASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 HSPA8P14-201ENST00000552265 1805 ntBASIC6.84□□□□□ -1.31
ZC3H4Q9UPT8 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.32
ZC3H4Q9UPT8 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
ZC3H4Q9UPT8 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.84□□□□□ -1.32
ZC3H4Q9UPT8 NLRP3P1-201ENST00000622303 1785 ntBASIC6.84□□□□□ -1.32
ZC3H4Q9UPT8 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.32
ZC3H4Q9UPT8 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
ZC3H4Q9UPT8 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
ZC3H4Q9UPT8 AC005725.1-201ENST00000577346 2607 ntBASIC6.83□□□□□ -1.32
ZC3H4Q9UPT8 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
ZC3H4Q9UPT8 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.83□□□□□ -1.32
ZC3H4Q9UPT8 Y_RNA.193-201ENST00000363979 102 ntBASIC6.83□□□□□ -1.32
ZC3H4Q9UPT8 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
ZC3H4Q9UPT8 RNU6-39P-201ENST00000384344 107 ntBASIC6.83□□□□□ -1.32
ZC3H4Q9UPT8 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
ZC3H4Q9UPT8 Y_RNA.618-201ENST00000410949 107 ntBASIC6.83□□□□□ -1.32
ZC3H4Q9UPT8 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC6.83□□□□□ -1.32
ZC3H4Q9UPT8 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.83□□□□□ -1.32
ZC3H4Q9UPT8 CBX3P6-201ENST00000430257 527 ntBASIC6.83□□□□□ -1.32
ZC3H4Q9UPT8 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
ZC3H4Q9UPT8 PRPS1P1-201ENST00000445305 876 ntBASIC6.83□□□□□ -1.32
ZC3H4Q9UPT8 AC105399.1-202ENST00000447303 205 ntBASIC6.83□□□□□ -1.32
ZC3H4Q9UPT8 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.83□□□□□ -1.32
ZC3H4Q9UPT8 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC6.83□□□□□ -1.32
ZC3H4Q9UPT8 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC6.83□□□□□ -1.32
ZC3H4Q9UPT8 MTCO2P24-201ENST00000515611 426 ntBASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms