Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.45□□□□□ -1.7
VPS4AQ9UN37 IGHV3-32-201ENST00000519182 355 ntBASIC4.45□□□□□ -1.7
VPS4AQ9UN37 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.45□□□□□ -1.7
VPS4AQ9UN37 GTF2IP22-201ENST00000554443 182 ntBASIC4.45□□□□□ -1.7
VPS4AQ9UN37 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.45□□□□□ -1.7
VPS4AQ9UN37 RPL21P7-201ENST00000557463 483 ntBASIC4.45□□□□□ -1.7
VPS4AQ9UN37 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.45□□□□□ -1.7
VPS4AQ9UN37 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS4AQ9UN37 AC015912.2-201ENST00000571053 181 ntBASIC4.45□□□□□ -1.7
VPS4AQ9UN37 MIR4637-201ENST00000582405 84 ntBASIC4.45□□□□□ -1.7
VPS4AQ9UN37 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.45□□□□□ -1.7
VPS4AQ9UN37 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.45□□□□□ -1.7
VPS4AQ9UN37 U73023.1-201ENST00000603134 700 ntBASIC4.45□□□□□ -1.7
VPS4AQ9UN37 AC004987.4-201ENST00000603383 338 ntBASIC4.45□□□□□ -1.7
VPS4AQ9UN37 AC128687.1-201ENST00000605304 619 ntBASIC4.45□□□□□ -1.7
VPS4AQ9UN37 FAM27B-201ENST00000610601 213 ntBASIC4.45□□□□□ -1.7
VPS4AQ9UN37 AC078899.5-201ENST00000612475 178 ntBASIC4.45□□□□□ -1.7
VPS4AQ9UN37 AC243773.3-201ENST00000613270 256 ntBASIC4.45□□□□□ -1.7
VPS4AQ9UN37 AC100793.4-201ENST00000613683 429 ntBASIC4.45□□□□□ -1.7
VPS4AQ9UN37 AC008121.2-201ENST00000614647 523 ntBASIC4.45□□□□□ -1.7
VPS4AQ9UN37 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.45□□□□□ -1.7
VPS4AQ9UN37 MIR6864-201ENST00000617935 70 ntBASIC4.45□□□□□ -1.7
VPS4AQ9UN37 AC140113.4-201ENST00000622087 222 ntBASIC4.45□□□□□ -1.7
VPS4AQ9UN37 AL356266.1-201ENST00000623311 483 ntBASIC4.45□□□□□ -1.7
VPS4AQ9UN37 AC084035.1-201ENST00000634543 607 ntBASIC4.45□□□□□ -1.7
VPS4AQ9UN37 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VPS4AQ9UN37 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VPS4AQ9UN37 CR383658.2-201ENST00000547576 1525 ntBASIC4.45□□□□□ -1.7
VPS4AQ9UN37 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS4AQ9UN37 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS4AQ9UN37 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS4AQ9UN37 AC022893.2-201ENST00000564832 3296 ntBASIC4.45□□□□□ -1.7
VPS4AQ9UN37 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VPS4AQ9UN37 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS4AQ9UN37 MTCO1P14-201ENST00000441695 1559 ntBASIC4.44□□□□□ -1.7
VPS4AQ9UN37 AC007529.1-201ENST00000418574 2178 ntBASIC4.44□□□□□ -1.7
VPS4AQ9UN37 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS4AQ9UN37 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
VPS4AQ9UN37 AC011978.2-201ENST00000569835 2054 ntBASIC4.44□□□□□ -1.7
VPS4AQ9UN37 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
VPS4AQ9UN37 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.44□□□□□ -1.7
VPS4AQ9UN37 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS4AQ9UN37 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS4AQ9UN37 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
VPS4AQ9UN37 MIR448-201ENST00000362131 111 ntBASIC4.44□□□□□ -1.7
VPS4AQ9UN37 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS4AQ9UN37 OR5H15-201ENST00000383696 930 ntBASIC4.44□□□□□ -1.7
VPS4AQ9UN37 RNU6-723P-201ENST00000383973 107 ntBASIC4.44□□□□□ -1.7
VPS4AQ9UN37 SNORA70F-201ENST00000384142 135 ntBASIC4.44□□□□□ -1.7
VPS4AQ9UN37 MIR129-1-201ENST00000384972 72 ntBASIC4.44□□□□□ -1.7
VPS4AQ9UN37 ELOCP19-201ENST00000411919 318 ntBASIC4.44□□□□□ -1.7
VPS4AQ9UN37 CDK8P2-201ENST00000415020 547 ntBASIC4.44□□□□□ -1.7
VPS4AQ9UN37 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS4AQ9UN37 MTCO2P34-201ENST00000421994 607 ntBASIC4.44□□□□□ -1.7
VPS4AQ9UN37 EIF4EP1-201ENST00000422311 642 ntBASIC4.44□□□□□ -1.7
VPS4AQ9UN37 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS4AQ9UN37 Z74021.1-201ENST00000423610 407 ntBASIC4.44□□□□□ -1.7
VPS4AQ9UN37 AL645608.4-201ENST00000423619 154 ntBASIC4.44□□□□□ -1.7
VPS4AQ9UN37 AC093698.1-201ENST00000423843 571 ntBASIC4.44□□□□□ -1.7
VPS4AQ9UN37 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS4AQ9UN37 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS4AQ9UN37 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS4AQ9UN37 AL357520.1-201ENST00000441557 453 ntBASIC4.44□□□□□ -1.7
VPS4AQ9UN37 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.44□□□□□ -1.7
VPS4AQ9UN37 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS4AQ9UN37 AC010733.1-201ENST00000451515 401 ntBASIC4.44□□□□□ -1.7
VPS4AQ9UN37 CEACAMP6-201ENST00000452007 574 ntBASIC4.44□□□□□ -1.7
VPS4AQ9UN37 RNU6-956P-201ENST00000458868 103 ntBASIC4.44□□□□□ -1.7
VPS4AQ9UN37 AC090142.1-201ENST00000465776 462 ntBASIC4.44□□□□□ -1.7
VPS4AQ9UN37 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VPS4AQ9UN37 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS4AQ9UN37 DEFB109F-201ENST00000491870 277 ntBASIC4.44□□□□□ -1.7
VPS4AQ9UN37 RN7SL604P-201ENST00000492589 296 ntBASIC4.44□□□□□ -1.7
VPS4AQ9UN37 OR4G11P-201ENST00000492842 939 ntBASIC4.44□□□□□ -1.7
VPS4AQ9UN37 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS4AQ9UN37 MTCYBP43-201ENST00000513621 740 ntBASIC4.44□□□□□ -1.7
VPS4AQ9UN37 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS4AQ9UN37 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS4AQ9UN37 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS4AQ9UN37 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS4AQ9UN37 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS4AQ9UN37 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS4AQ9UN37 HSPE1P3-201ENST00000559254 309 ntBASIC4.44□□□□□ -1.7
VPS4AQ9UN37 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS4AQ9UN37 PCMTD1P2-201ENST00000565017 355 ntBASIC4.44□□□□□ -1.7
VPS4AQ9UN37 AP001004.1-201ENST00000582468 324 ntBASIC4.44□□□□□ -1.7
VPS4AQ9UN37 RPL12P25-202ENST00000598100 674 ntBASIC4.44□□□□□ -1.7
VPS4AQ9UN37 AC078795.2-201ENST00000602835 1252 ntBASIC4.44□□□□□ -1.7
VPS4AQ9UN37 AC010857.1-201ENST00000606398 594 ntBASIC4.44□□□□□ -1.7
VPS4AQ9UN37 AC104073.3-201ENST00000610942 955 ntBASIC4.44□□□□□ -1.7
VPS4AQ9UN37 AC005086.4-201ENST00000623065 213 ntBASIC4.44□□□□□ -1.7
VPS4AQ9UN37 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS4AQ9UN37 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS4AQ9UN37 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS4AQ9UN37 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
VPS4AQ9UN37 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
VPS4AQ9UN37 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS4AQ9UN37 AC006971.1-201ENST00000407916 4486 ntBASIC4.44□□□□□ -1.7
VPS4AQ9UN37 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
VPS4AQ9UN37 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 262.7 ms