Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 SNORA27.3-201ENST00000364937 134 ntBASIC4.04□□□□□ -1.76
CTNNA3Q9UI47 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.04□□□□□ -1.76
CTNNA3Q9UI47 EI24P2-201ENST00000397776 1076 ntBASIC4.04□□□□□ -1.76
CTNNA3Q9UI47 Z86062.1-201ENST00000406773 777 ntBASIC4.04□□□□□ -1.76
CTNNA3Q9UI47 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.04□□□□□ -1.76
CTNNA3Q9UI47 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.04□□□□□ -1.76
CTNNA3Q9UI47 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.04□□□□□ -1.76
CTNNA3Q9UI47 RPL21P110-201ENST00000433345 446 ntBASIC4.04□□□□□ -1.76
CTNNA3Q9UI47 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CTNNA3Q9UI47 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.04□□□□□ -1.76
CTNNA3Q9UI47 RPL26P28-201ENST00000451325 435 ntBASIC4.04□□□□□ -1.76
CTNNA3Q9UI47 AL513343.1-201ENST00000451818 792 ntBASIC4.04□□□□□ -1.76
CTNNA3Q9UI47 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.04□□□□□ -1.76
CTNNA3Q9UI47 RPS4XP13-201ENST00000483219 789 ntBASIC4.04□□□□□ -1.76
CTNNA3Q9UI47 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.04□□□□□ -1.76
CTNNA3Q9UI47 MTCO1P31-201ENST00000506355 492 ntBASIC4.04□□□□□ -1.76
CTNNA3Q9UI47 HMGB3P15-201ENST00000507326 574 ntBASIC4.04□□□□□ -1.76
CTNNA3Q9UI47 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CTNNA3Q9UI47 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CTNNA3Q9UI47 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.04□□□□□ -1.76
CTNNA3Q9UI47 AC090425.2-201ENST00000608818 501 ntBASIC4.04□□□□□ -1.76
CTNNA3Q9UI47 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CTNNA3Q9UI47 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CTNNA3Q9UI47 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CTNNA3Q9UI47 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
CTNNA3Q9UI47 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CTNNA3Q9UI47 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
CTNNA3Q9UI47 NSRP1P1-201ENST00000444067 1693 ntBASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 METTL21EP-201ENST00000298105 713 ntBASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 SNORA38.1-201ENST00000364172 131 ntBASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 SNORA51.2-201ENST00000364595 132 ntBASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 U3.19-201ENST00000390893 196 ntBASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 RPL31P2-201ENST00000413849 377 ntBASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 AC244098.2-201ENST00000422068 99 ntBASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 RPL23AP82-202ENST00000427528 469 ntBASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 NEK4P1-201ENST00000433383 879 ntBASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 AL662791.1-201ENST00000441992 928 ntBASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 AC097499.1-201ENST00000444277 208 ntBASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 AC069540.1-201ENST00000446320 988 ntBASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 CENPBD1P1-201ENST00000464061 469 ntBASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 AC104689.1-201ENST00000473356 768 ntBASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 AC021205.2-201ENST00000480069 347 ntBASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 HIGD1AP3-201ENST00000515857 278 ntBASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 RNU6-760P-201ENST00000516078 97 ntBASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 SNORA31.13-201ENST00000516624 135 ntBASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 RNU6-551P-201ENST00000516661 103 ntBASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 AC007458.1-201ENST00000542812 373 ntBASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 AC011611.1-201ENST00000552179 197 ntBASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 AC106782.4-201ENST00000568264 210 ntBASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 SNRPGP15-201ENST00000600149 222 ntBASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 YWHAQP7-201ENST00000603536 658 ntBASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 AC009948.4-201ENST00000604692 675 ntBASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 AL356321.1-201ENST00000621360 228 ntBASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CTNNA3Q9UI47 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.02□□□□□ -1.77
CTNNA3Q9UI47 AC138915.3-201ENST00000562908 1389 ntBASIC4.02□□□□□ -1.77
CTNNA3Q9UI47 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.02□□□□□ -1.77
CTNNA3Q9UI47 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CTNNA3Q9UI47 CR383658.2-201ENST00000547576 1525 ntBASIC4.02□□□□□ -1.77
CTNNA3Q9UI47 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.02□□□□□ -1.77
CTNNA3Q9UI47 LINC01347-201ENST00000417964 355 ntBASIC4.02□□□□□ -1.77
CTNNA3Q9UI47 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CTNNA3Q9UI47 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.02□□□□□ -1.77
CTNNA3Q9UI47 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.02□□□□□ -1.77
CTNNA3Q9UI47 RPS27P29-201ENST00000463110 252 ntBASIC4.02□□□□□ -1.77
CTNNA3Q9UI47 AL136126.1-201ENST00000473603 402 ntBASIC4.02□□□□□ -1.77
CTNNA3Q9UI47 RPS4XP22-201ENST00000480755 780 ntBASIC4.02□□□□□ -1.77
CTNNA3Q9UI47 AC093663.1-201ENST00000497190 394 ntBASIC4.02□□□□□ -1.77
CTNNA3Q9UI47 RPL23AP55-201ENST00000498163 452 ntBASIC4.02□□□□□ -1.77
CTNNA3Q9UI47 AC008494.2-201ENST00000514544 370 ntBASIC4.02□□□□□ -1.77
CTNNA3Q9UI47 RN7SKP244-201ENST00000516513 307 ntBASIC4.02□□□□□ -1.77
CTNNA3Q9UI47 RN7SKP96-201ENST00000516948 297 ntBASIC4.02□□□□□ -1.77
CTNNA3Q9UI47 RN7SKP289-201ENST00000517244 295 ntBASIC4.02□□□□□ -1.77
CTNNA3Q9UI47 AC022784.5-201ENST00000522241 437 ntBASIC4.02□□□□□ -1.77
CTNNA3Q9UI47 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.02□□□□□ -1.77
CTNNA3Q9UI47 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.02□□□□□ -1.77
CTNNA3Q9UI47 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.02□□□□□ -1.77
CTNNA3Q9UI47 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.02□□□□□ -1.77
CTNNA3Q9UI47 CBX3P2-202ENST00000583365 535 ntBASIC4.02□□□□□ -1.77
CTNNA3Q9UI47 AC016911.1-201ENST00000613297 452 ntBASIC4.02□□□□□ -1.77
CTNNA3Q9UI47 AC009032.1-201ENST00000617574 431 ntBASIC4.02□□□□□ -1.77
CTNNA3Q9UI47 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms