Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.43□□□□□ -1.7
RIMBP3Q9UFD9 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
RIMBP3Q9UFD9 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
RIMBP3Q9UFD9 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RIMBP3Q9UFD9 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.43□□□□□ -1.7
RIMBP3Q9UFD9 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.43□□□□□ -1.7
RIMBP3Q9UFD9 RPL23AP15-201ENST00000450202 459 ntBASIC4.43□□□□□ -1.7
RIMBP3Q9UFD9 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.43□□□□□ -1.7
RIMBP3Q9UFD9 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.43□□□□□ -1.7
RIMBP3Q9UFD9 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.43□□□□□ -1.7
RIMBP3Q9UFD9 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.43□□□□□ -1.7
RIMBP3Q9UFD9 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
RIMBP3Q9UFD9 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
RIMBP3Q9UFD9 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RIMBP3Q9UFD9 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RIMBP3Q9UFD9 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.42□□□□□ -1.7
RIMBP3Q9UFD9 FCF1P1-201ENST00000432690 571 ntBASIC4.42□□□□□ -1.7
RIMBP3Q9UFD9 AL162389.1-201ENST00000449233 177 ntBASIC4.42□□□□□ -1.7
RIMBP3Q9UFD9 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.42□□□□□ -1.7
RIMBP3Q9UFD9 AC009063.1-201ENST00000563342 702 ntBASIC4.42□□□□□ -1.7
RIMBP3Q9UFD9 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RIMBP3Q9UFD9 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RIMBP3Q9UFD9 AC012020.1-201ENST00000624541 1728 ntBASIC4.41□□□□□ -1.7
RIMBP3Q9UFD9 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RIMBP3Q9UFD9 RNU1-89P-201ENST00000384592 164 ntBASIC4.41□□□□□ -1.7
RIMBP3Q9UFD9 snoU13.18-201ENST00000459483 104 ntBASIC4.41□□□□□ -1.7
RIMBP3Q9UFD9 AC010307.1-201ENST00000467206 836 ntBASIC4.41□□□□□ -1.7
RIMBP3Q9UFD9 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.41□□□□□ -1.7
RIMBP3Q9UFD9 RNA5SP282-201ENST00000516355 108 ntBASIC4.41□□□□□ -1.7
RIMBP3Q9UFD9 AC022069.1-201ENST00000582910 658 ntBASIC4.41□□□□□ -1.7
RIMBP3Q9UFD9 VN1R9P-201ENST00000614184 867 ntBASIC4.41□□□□□ -1.7
RIMBP3Q9UFD9 AC079228.1-201ENST00000624774 1049 ntBASIC4.41□□□□□ -1.7
RIMBP3Q9UFD9 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
RIMBP3Q9UFD9 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.41□□□□□ -1.7
RIMBP3Q9UFD9 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RIMBP3Q9UFD9 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RIMBP3Q9UFD9 TRBV8-2-201ENST00000475637 270 ntBASIC4.4□□□□□ -1.7
RIMBP3Q9UFD9 AC090525.1-201ENST00000479116 478 ntBASIC4.4□□□□□ -1.7
RIMBP3Q9UFD9 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.4□□□□□ -1.7
RIMBP3Q9UFD9 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.4□□□□□ -1.7
RIMBP3Q9UFD9 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RIMBP3Q9UFD9 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC4.4□□□□□ -1.71
RIMBP3Q9UFD9 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC4.4□□□□□ -1.71
RIMBP3Q9UFD9 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.4□□□□□ -1.71
RIMBP3Q9UFD9 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
RIMBP3Q9UFD9 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RIMBP3Q9UFD9 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
RIMBP3Q9UFD9 AP002088.1-201ENST00000382740 395 ntBASIC4.39□□□□□ -1.71
RIMBP3Q9UFD9 MIR518C-201ENST00000384822 101 ntBASIC4.39□□□□□ -1.71
RIMBP3Q9UFD9 MIR518E-201ENST00000385252 88 ntBASIC4.39□□□□□ -1.71
RIMBP3Q9UFD9 EI24P2-201ENST00000397776 1076 ntBASIC4.39□□□□□ -1.71
RIMBP3Q9UFD9 SSR1P1-201ENST00000407630 814 ntBASIC4.39□□□□□ -1.71
RIMBP3Q9UFD9 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.39□□□□□ -1.71
RIMBP3Q9UFD9 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.39□□□□□ -1.71
RIMBP3Q9UFD9 AC011753.1-201ENST00000451001 220 ntBASIC4.39□□□□□ -1.71
RIMBP3Q9UFD9 SYT14P1-201ENST00000481459 721 ntBASIC4.39□□□□□ -1.71
RIMBP3Q9UFD9 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.39□□□□□ -1.71
RIMBP3Q9UFD9 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.39□□□□□ -1.71
RIMBP3Q9UFD9 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.39□□□□□ -1.71
RIMBP3Q9UFD9 MIR4738-201ENST00000579134 87 ntBASIC4.39□□□□□ -1.71
RIMBP3Q9UFD9 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.39□□□□□ -1.71
RIMBP3Q9UFD9 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RIMBP3Q9UFD9 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.39□□□□□ -1.71
RIMBP3Q9UFD9 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.39□□□□□ -1.71
RIMBP3Q9UFD9 TRIM60P18-201ENST00000441518 828 ntBASIC4.39□□□□□ -1.71
RIMBP3Q9UFD9 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.39□□□□□ -1.71
RIMBP3Q9UFD9 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.39□□□□□ -1.71
RIMBP3Q9UFD9 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.39□□□□□ -1.71
RIMBP3Q9UFD9 AC007938.3-201ENST00000604965 623 ntBASIC4.39□□□□□ -1.71
RIMBP3Q9UFD9 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RIMBP3Q9UFD9 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.39□□□□□ -1.71
RIMBP3Q9UFD9 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RIMBP3Q9UFD9 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.38□□□□□ -1.71
RIMBP3Q9UFD9 Y_RNA.116-201ENST00000363292 103 ntBASIC4.38□□□□□ -1.71
RIMBP3Q9UFD9 RNU6-253P-201ENST00000384730 105 ntBASIC4.38□□□□□ -1.71
RIMBP3Q9UFD9 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.38□□□□□ -1.71
RIMBP3Q9UFD9 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RIMBP3Q9UFD9 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.38□□□□□ -1.71
RIMBP3Q9UFD9 AC068587.2-201ENST00000478386 781 ntBASIC4.38□□□□□ -1.71
RIMBP3Q9UFD9 PRELID3BP7-201ENST00000503606 469 ntBASIC4.38□□□□□ -1.71
RIMBP3Q9UFD9 MTND4P2-201ENST00000507767 1203 ntBASIC4.38□□□□□ -1.71
RIMBP3Q9UFD9 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.38□□□□□ -1.71
RIMBP3Q9UFD9 OR4U1P-201ENST00000554958 912 ntBASIC4.38□□□□□ -1.71
RIMBP3Q9UFD9 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.38□□□□□ -1.71
RIMBP3Q9UFD9 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RIMBP3Q9UFD9 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
RIMBP3Q9UFD9 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.38□□□□□ -1.71
RIMBP3Q9UFD9 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RIMBP3Q9UFD9 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.37□□□□□ -1.71
RIMBP3Q9UFD9 AC104454.1-201ENST00000421341 1401 ntBASIC4.37□□□□□ -1.71
RIMBP3Q9UFD9 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RIMBP3Q9UFD9 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.37□□□□□ -1.71
RIMBP3Q9UFD9 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RIMBP3Q9UFD9 MIR30E-201ENST00000362104 92 ntBASIC4.37□□□□□ -1.71
RIMBP3Q9UFD9 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RIMBP3Q9UFD9 PTP4A1P5-201ENST00000420305 455 ntBASIC4.37□□□□□ -1.71
RIMBP3Q9UFD9 HIGD1AP2-201ENST00000446367 280 ntBASIC4.37□□□□□ -1.71
RIMBP3Q9UFD9 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC4.37□□□□□ -1.71
RIMBP3Q9UFD9 RNU1-143P-201ENST00000516296 146 ntBASIC4.37□□□□□ -1.71
RIMBP3Q9UFD9 NARSP2-201ENST00000518524 679 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms